Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
CACNA1FO60840 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1FO60840 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA1FO60840 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1FO60840 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA1FO60840 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1FO60840 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19■□□□□ 0.63
CACNA1FO60840 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA1FO60840 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC19■□□□□ 0.63
CACNA1FO60840 BTBD6P1-201ENST00000412176 1267 ntBASIC19■□□□□ 0.63
CACNA1FO60840 AC006033.1-201ENST00000440505 426 ntBASIC19■□□□□ 0.63
CACNA1FO60840 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1FO60840 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19■□□□□ 0.63
CACNA1FO60840 AC009955.4-201ENST00000597192 544 ntBASIC19■□□□□ 0.63
CACNA1FO60840 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19■□□□□ 0.63
CACNA1FO60840 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1FO60840 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1FO60840 AC013726.1-201ENST00000563747 2285 ntBASIC19■□□□□ 0.63
CACNA1FO60840 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1FO60840 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CACNA1FO60840 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC19■□□□□ 0.63
CACNA1FO60840 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1FO60840 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CACNA1FO60840 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1FO60840 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19■□□□□ 0.63
CACNA1FO60840 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CACNA1FO60840 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.99■□□□□ 0.63
CACNA1FO60840 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.99■□□□□ 0.63
CACNA1FO60840 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.99■□□□□ 0.63
CACNA1FO60840 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CACNA1FO60840 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.99■□□□□ 0.63
CACNA1FO60840 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.99■□□□□ 0.63
CACNA1FO60840 CHMP1AP1-201ENST00000445563 662 ntBASIC18.99■□□□□ 0.63
CACNA1FO60840 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 ZNF767P-206ENST00000513792 565 ntBASIC18.99■□□□□ 0.63
CACNA1FO60840 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.99■□□□□ 0.63
CACNA1FO60840 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.99■□□□□ 0.63
CACNA1FO60840 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.99■□□□□ 0.63
CACNA1FO60840 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.99■□□□□ 0.63
CACNA1FO60840 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
CACNA1FO60840 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.99■□□□□ 0.63
CACNA1FO60840 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.99■□□□□ 0.63
CACNA1FO60840 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.99■□□□□ 0.63
CACNA1FO60840 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CACNA1FO60840 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.99■□□□□ 0.63
CACNA1FO60840 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.99■□□□□ 0.63
CACNA1FO60840 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CACNA1FO60840 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CACNA1FO60840 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.99■□□□□ 0.63
CACNA1FO60840 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CACNA1FO60840 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 BRWD1P1-201ENST00000401091 371 ntBASIC18.99■□□□□ 0.63
CACNA1FO60840 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.99■□□□□ 0.63
CACNA1FO60840 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC18.99■□□□□ 0.63
CACNA1FO60840 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CACNA1FO60840 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA1FO60840 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CACNA1FO60840 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.98■□□□□ 0.63
CACNA1FO60840 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA1FO60840 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA1FO60840 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.98■□□□□ 0.63
CACNA1FO60840 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.98■□□□□ 0.63
CACNA1FO60840 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.98■□□□□ 0.63
CACNA1FO60840 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA1FO60840 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CACNA1FO60840 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.98■□□□□ 0.63
CACNA1FO60840 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.98■□□□□ 0.63
CACNA1FO60840 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.98■□□□□ 0.63
CACNA1FO60840 GOLGA2P4-201ENST00000441462 777 ntBASIC18.98■□□□□ 0.63
CACNA1FO60840 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.98■□□□□ 0.63
CACNA1FO60840 AL096828.3-201ENST00000615354 462 ntBASIC18.98■□□□□ 0.63
CACNA1FO60840 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.98■□□□□ 0.63
CACNA1FO60840 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA1FO60840 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA1FO60840 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA1FO60840 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CACNA1FO60840 CICP23-201ENST00000605013 2741 ntBASIC18.98■□□□□ 0.63
CACNA1FO60840 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA1FO60840 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA1FO60840 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CACNA1FO60840 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA1FO60840 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CACNA1FO60840 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CACNA1FO60840 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CACNA1FO60840 RPSAP36-202ENST00000494591 1261 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms