Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA12O60330 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA12O60330 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA12O60330 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA12O60330 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA12O60330 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA12O60330 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA12O60330 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA12O60330 AC006033.1-201ENST00000440505 426 ntBASIC15.3■□□□□ 0.04
PCDHGA12O60330 GOLGA2P4-201ENST00000441462 777 ntBASIC15.3■□□□□ 0.04
PCDHGA12O60330 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 DRD5P1-201ENST00000456605 1438 ntBASIC15.3■□□□□ 0.04
PCDHGA12O60330 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA12O60330 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA12O60330 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA12O60330 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA12O60330 LINC02228-204ENST00000642115 2962 ntBASIC15.3■□□□□ 0.04
PCDHGA12O60330 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA12O60330 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGA12O60330 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.29■□□□□ 0.04
PCDHGA12O60330 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 FAM86HP-204ENST00000513466 959 ntBASIC15.29■□□□□ 0.04
PCDHGA12O60330 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 AC025279.2-201ENST00000569730 653 ntBASIC15.29■□□□□ 0.04
PCDHGA12O60330 AC097359.3-201ENST00000603982 1210 ntBASIC15.29■□□□□ 0.04
PCDHGA12O60330 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA12O60330 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA12O60330 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms