Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC28A2O43868 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC28A2O43868 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC28A2O43868 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A2O43868 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SLC28A2O43868 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SLC28A2O43868 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A2O43868 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A2O43868 AC018665.1-201ENST00000622927 1362 ntBASIC14.93□□□□□ -0.02
SLC28A2O43868 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A2O43868 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A2O43868 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A2O43868 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SLC28A2O43868 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A2O43868 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SLC28A2O43868 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A2O43868 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC28A2O43868 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC28A2O43868 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
SLC28A2O43868 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 AC097376.2-205ENST00000610159 5334 ntBASIC14.92□□□□□ -0.02
SLC28A2O43868 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.92□□□□□ -0.02
SLC28A2O43868 AC099063.4-201ENST00000641099 1602 ntBASIC14.92□□□□□ -0.02
SLC28A2O43868 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC28A2O43868 AC023824.1-201ENST00000562945 2975 ntBASIC14.92□□□□□ -0.02
SLC28A2O43868 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC28A2O43868 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SLC28A2O43868 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC28A2O43868 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SLC28A2O43868 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC28A2O43868 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SLC28A2O43868 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SLC28A2O43868 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SLC28A2O43868 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC28A2O43868 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC28A2O43868 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SLC28A2O43868 AC114501.2-201ENST00000439631 535 ntBASIC14.92□□□□□ -0.02
SLC28A2O43868 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC28A2O43868 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.92□□□□□ -0.02
SLC28A2O43868 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SLC28A2O43868 AL512361.1-201ENST00000554200 418 ntBASIC14.92□□□□□ -0.02
SLC28A2O43868 AC023310.3-201ENST00000557027 670 ntBASIC14.92□□□□□ -0.02
SLC28A2O43868 AC100756.1-201ENST00000562736 682 ntBASIC14.92□□□□□ -0.02
SLC28A2O43868 AC138749.3-201ENST00000567691 622 ntBASIC14.92□□□□□ -0.02
SLC28A2O43868 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC28A2O43868 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SLC28A2O43868 AC116165.1-201ENST00000611806 668 ntBASIC14.92□□□□□ -0.02
SLC28A2O43868 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC28A2O43868 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.92□□□□□ -0.02
SLC28A2O43868 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.92□□□□□ -0.02
SLC28A2O43868 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 BNIP3P1-202ENST00000550043 1585 ntBASIC14.92□□□□□ -0.02
SLC28A2O43868 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC28A2O43868 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC28A2O43868 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SLC28A2O43868 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.92□□□□□ -0.02
SLC28A2O43868 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SLC28A2O43868 PDIA3P1-201ENST00000471856 1510 ntBASIC14.92□□□□□ -0.02
SLC28A2O43868 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC28A2O43868 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC28A2O43868 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC28A2O43868 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC28A2O43868 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC28A2O43868 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 AC018892.3-201ENST00000623986 2499 ntBASIC14.91□□□□□ -0.02
SLC28A2O43868 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SLC28A2O43868 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SLC28A2O43868 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SLC28A2O43868 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC28A2O43868 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms