Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 AKAP8P1-201ENST00000434743 1349 ntBASIC13.22□□□□□ -0.29
TMEM235A6NFC5 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 HLA-H-201ENST00000383620 1096 ntBASIC13.22□□□□□ -0.29
TMEM235A6NFC5 KRT18P2-201ENST00000447938 1258 ntBASIC13.22□□□□□ -0.29
TMEM235A6NFC5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 AL135744.1-201ENST00000565098 629 ntBASIC13.22□□□□□ -0.29
TMEM235A6NFC5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 AC087386.2-201ENST00000623212 4637 ntBASIC13.22□□□□□ -0.29
TMEM235A6NFC5 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM235A6NFC5 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 HSPA7-201ENST00000445535 1927 ntBASIC13.21□□□□□ -0.29
TMEM235A6NFC5 AC113367.3-201ENST00000508316 1912 ntBASIC13.21□□□□□ -0.29
TMEM235A6NFC5 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 AC010327.5-201ENST00000586923 3061 ntBASIC13.21□□□□□ -0.29
TMEM235A6NFC5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 MIR1224-201ENST00000408193 85 ntBASIC13.21□□□□□ -0.29
TMEM235A6NFC5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 AC007967.2-201ENST00000432613 625 ntBASIC13.21□□□□□ -0.29
TMEM235A6NFC5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 KRT18P56-201ENST00000507275 550 ntBASIC13.21□□□□□ -0.29
TMEM235A6NFC5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM235A6NFC5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM235A6NFC5 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM235A6NFC5 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM235A6NFC5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM235A6NFC5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TMEM235A6NFC5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TMEM235A6NFC5 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms