Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC025048.3-201ENST00000590609 569 ntBASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AC005702.4-201ENST00000618393 416 ntBASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AC139749.1-202ENST00000617529 3139 ntBASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 AC092580.3-201ENST00000430932 139 ntBASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 AC097493.3-201ENST00000509725 367 ntBASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 SLED1-202ENST00000512051 380 ntBASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 SDHAP3-202ENST00000515467 728 ntBASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 ZNF890P-202ENST00000530367 1156 ntBASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 AC074044.1-201ENST00000609673 707 ntBASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 AL390755.1-201ENST00000623716 2027 ntBASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 AC090616.6-203ENST00000579186 1945 ntBASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 AC100757.3-201ENST00000622361 1406 ntBASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
HLA-DRB4X5D2U9 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DRB4X5D2U9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms