Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 AC114271.1-201ENST00000612689 2813 ntBASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 AC004945.1-201ENST00000416738 983 ntBASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 AC128676.1-201ENST00000454392 318 ntBASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 AC011467.2-201ENST00000598425 242 ntBASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 AL353801.3-201ENST00000609898 542 ntBASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 AC073548.1-201ENST00000624088 1882 ntBASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
TRAPPC1Q9Y5R8 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 AC020658.7-201ENST00000624274 2442 ntBASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
TRAPPC1Q9Y5R8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 AC055811.4-201ENST00000624039 1754 ntBASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 PAWRP1-201ENST00000451083 565 ntBASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.7□□□□□ -0.54
TRAPPC1Q9Y5R8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms