Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 AL390755.1-201ENST00000623716 2027 ntBASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 AC023024.2-201ENST00000623561 1993 ntBASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PCDHGA11Q9Y5H2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 AC100757.3-201ENST00000622361 1406 ntBASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 AC232323.1-201ENST00000540724 2099 ntBASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 REXO1L5P-201ENST00000622260 2098 ntBASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 MIR943-201ENST00000401286 94 ntBASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 AC241585.1-201ENST00000433527 519 ntBASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 KRT18P64-201ENST00000434946 1219 ntBASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 LINC01115-203ENST00000606068 577 ntBASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 AL590560.3-201ENST00000623350 461 ntBASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 AC138969.3-201ENST00000546612 1459 ntBASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 AC138932.2-201ENST00000548268 1459 ntBASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 AC126755.4-201ENST00000549796 1459 ntBASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 AGAP7P-201ENST00000582299 2062 ntBASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 AGAP14-201ENST00000624701 2060 ntBASIC15.01□□□□□ -0.01
PCDHGA11Q9Y5H2 GRK6P1-201ENST00000400595 1711 ntBASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 HLA-DRB6-201ENST00000411500 1235 ntBASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms