Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 HSPB1P2-201ENST00000448722 546 ntBASIC15.97■□□□□ 0.15
YIPF1Q9Y548 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 AC106820.3-201ENST00000561653 397 ntBASIC15.97■□□□□ 0.15
YIPF1Q9Y548 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 AL139099.5-201ENST00000635274 300 ntBASIC15.97■□□□□ 0.15
YIPF1Q9Y548 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 MST1L-201ENST00000442552 2185 ntBASIC15.97■□□□□ 0.15
YIPF1Q9Y548 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 AL360270.3-201ENST00000609118 1348 ntBASIC15.96■□□□□ 0.15
YIPF1Q9Y548 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 MIR663B-201ENST00000408361 115 ntBASIC15.96■□□□□ 0.15
YIPF1Q9Y548 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.96■□□□□ 0.15
YIPF1Q9Y548 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 AC138466.3-201ENST00000619983 221 ntBASIC15.96■□□□□ 0.15
YIPF1Q9Y548 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
YIPF1Q9Y548 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
YIPF1Q9Y548 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
YIPF1Q9Y548 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
YIPF1Q9Y548 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
YIPF1Q9Y548 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
YIPF1Q9Y548 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
YIPF1Q9Y548 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
YIPF1Q9Y548 CLUHP2-201ENST00000426660 1303 ntBASIC15.95■□□□□ 0.14
YIPF1Q9Y548 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 AC018735.1-201ENST00000437208 1502 ntBASIC15.95■□□□□ 0.14
YIPF1Q9Y548 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.95■□□□□ 0.14
YIPF1Q9Y548 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms