Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 KRT8P29-201ENST00000420409 1371 ntBASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 CICP11-201ENST00000434745 2827 ntBASIC18.5■□□□□ 0.55
LEMD3Q9Y2U8 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 AC090616.6-203ENST00000579186 1945 ntBASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 RNA5SP423-201ENST00000517127 109 ntBASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 AC022748.3-201ENST00000621828 275 ntBASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 AL391005.1-201ENST00000623953 2435 ntBASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LEMD3Q9Y2U8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 AC012508.2-201ENST00000567613 1472 ntBASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 RN7SKP175-201ENST00000408472 289 ntBASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LEMD3Q9Y2U8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LEMD3Q9Y2U8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LEMD3Q9Y2U8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LEMD3Q9Y2U8 REXO1L4P-201ENST00000605109 1937 ntBASIC18.47■□□□□ 0.55
LEMD3Q9Y2U8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms