Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 HLA-K-203ENST00000430151 1046 ntBASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 AP001063.1-201ENST00000568332 529 ntBASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 AL358472.5-202ENST00000641448 1267 ntBASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 AL157414.3-201ENST00000624276 1954 ntBASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHA4Q9UN74 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 RNU1-114P-201ENST00000365297 166 ntBASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 ACKR1-201ENST00000368121 1240 ntBASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 AP005019.2-201ENST00000615104 511 ntBASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 AC105233.6-201ENST00000642093 218 ntBASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 REXO1L5P-201ENST00000622260 2098 ntBASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHA4Q9UN74 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 LINC00528-201ENST00000600723 2160 ntBASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDHA4Q9UN74 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms