Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 RPL7P3-201ENST00000441388 714 ntBASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 AP000812.2-201ENST00000538934 718 ntBASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 AL645728.2-202ENST00000641679 227 ntBASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 AC148477.4-201ENST00000613430 1793 ntBASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.7■□□□□ 0.58
HMG20BQ9P0W2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 KLF2P2-201ENST00000416807 1039 ntBASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 AC016694.1-201ENST00000434179 700 ntBASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 BNIP3P42-201ENST00000454982 569 ntBASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 BNIP3P29-201ENST00000598302 571 ntBASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 AC145423.3-201ENST00000615987 467 ntBASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 AC011447.5-201ENST00000616168 564 ntBASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 AL138709.1-201ENST00000614840 1693 ntBASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMG20BQ9P0W2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 AC099336.1-201ENST00000417053 1171 ntBASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 AC025279.2-201ENST00000569730 653 ntBASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 AC006058.4-201ENST00000624016 1670 ntBASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 KRT8P35-201ENST00000483942 1338 ntBASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms