Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 REXO1L2P-201ENST00000425429 2069 ntBASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 RPL5P21-201ENST00000404620 815 ntBASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 BASP1P1-201ENST00000430708 665 ntBASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 TIMM8BP1-201ENST00000452384 211 ntBASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 PRYP6-201ENST00000514804 343 ntBASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 AC005225.4-201ENST00000557330 545 ntBASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
CCM2LQ9NUG4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 AC061975.2-201ENST00000581722 295 ntBASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 AL137784.3-201ENST00000623858 2288 ntBASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 INTS4P1-203ENST00000641008 3683 ntBASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCM2LQ9NUG4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms