Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 HCG4B-203ENST00000450128 991 ntBASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 AC093909.1-201ENST00000504731 1122 ntBASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 PRYP6-201ENST00000514804 343 ntBASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 AL031284.1-201ENST00000419297 478 ntBASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 RHOQP3-201ENST00000437982 621 ntBASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 AC140658.5-201ENST00000438532 169 ntBASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
C12orf4Q9NQ89 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms