Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 GGT3P-204ENST00000453783 1664 ntBASIC16.31■□□□□ 0.2
CD248Q9HCU0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 AC079776.1-201ENST00000401540 1152 ntBASIC16.31■□□□□ 0.2
CD248Q9HCU0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 GIMAP3P-201ENST00000495150 836 ntBASIC16.31■□□□□ 0.2
CD248Q9HCU0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 AC023310.3-201ENST00000557027 670 ntBASIC16.31■□□□□ 0.2
CD248Q9HCU0 AC100756.1-201ENST00000562736 682 ntBASIC16.31■□□□□ 0.2
CD248Q9HCU0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 AC138749.3-201ENST00000567691 622 ntBASIC16.31■□□□□ 0.2
CD248Q9HCU0 AC092337.1-201ENST00000568699 1129 ntBASIC16.31■□□□□ 0.2
CD248Q9HCU0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 AC099568.2-201ENST00000609194 695 ntBASIC16.31■□□□□ 0.2
CD248Q9HCU0 AC116165.1-201ENST00000611806 668 ntBASIC16.31■□□□□ 0.2
CD248Q9HCU0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 AL109936.8-201ENST00000641772 604 ntBASIC16.31■□□□□ 0.2
CD248Q9HCU0 AC068587.6-202ENST00000641839 5619 ntBASIC16.31■□□□□ 0.2
CD248Q9HCU0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 U82695.1-201ENST00000635752 1889 ntBASIC16.31■□□□□ 0.2
CD248Q9HCU0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CD248Q9HCU0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD248Q9HCU0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.3■□□□□ 0.2
CD248Q9HCU0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 AC055876.2-201ENST00000531834 546 ntBASIC16.3■□□□□ 0.2
CD248Q9HCU0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 MIR4321-201ENST00000592276 80 ntBASIC16.3■□□□□ 0.2
CD248Q9HCU0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 AL136982.4-201ENST00000437689 1740 ntBASIC16.3■□□□□ 0.2
CD248Q9HCU0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 AC126755.1-201ENST00000525846 6405 ntBASIC16.3■□□□□ 0.2
CD248Q9HCU0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD248Q9HCU0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.3■□□□□ 0.2
CD248Q9HCU0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD248Q9HCU0 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms