Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 MIR769-201ENST00000390225 118 ntBASIC17.96■□□□□ 0.47
EFCC1Q9HA90 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.96■□□□□ 0.47
EFCC1Q9HA90 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 POM121L10P-201ENST00000436994 1285 ntBASIC17.96■□□□□ 0.47
EFCC1Q9HA90 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 FTLP1-201ENST00000449155 526 ntBASIC17.96■□□□□ 0.47
EFCC1Q9HA90 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 KRT18P25-201ENST00000508931 1278 ntBASIC17.96■□□□□ 0.47
EFCC1Q9HA90 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 AC126915.1-201ENST00000522847 1038 ntBASIC17.96■□□□□ 0.47
EFCC1Q9HA90 AC107373.2-201ENST00000607735 490 ntBASIC17.96■□□□□ 0.47
EFCC1Q9HA90 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 AC145423.3-201ENST00000615987 467 ntBASIC17.96■□□□□ 0.47
EFCC1Q9HA90 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.96■□□□□ 0.47
EFCC1Q9HA90 DBET-201ENST00000630918 3363 ntBASIC17.96■□□□□ 0.46
EFCC1Q9HA90 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.96■□□□□ 0.46
EFCC1Q9HA90 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.95■□□□□ 0.46
EFCC1Q9HA90 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 CYP46A4P-201ENST00000414953 267 ntBASIC17.95■□□□□ 0.46
EFCC1Q9HA90 RPL17P11-201ENST00000417593 544 ntBASIC17.95■□□□□ 0.46
EFCC1Q9HA90 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 RNA5SP486-201ENST00000515961 83 ntBASIC17.95■□□□□ 0.46
EFCC1Q9HA90 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 AL353726.2-201ENST00000623259 884 ntBASIC17.95■□□□□ 0.46
EFCC1Q9HA90 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.95■□□□□ 0.46
EFCC1Q9HA90 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EFCC1Q9HA90 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms