Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 RPL5P21-201ENST00000404620 815 ntBASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 AC097359.3-201ENST00000603982 1210 ntBASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 AL121772.3-201ENST00000610840 674 ntBASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 AC084364.1-201ENST00000551967 1556 ntBASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 AC018442.1-201ENST00000421439 2061 ntBASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RHOXF2Q9BQY4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 KRT8P37-201ENST00000451609 1420 ntBASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 AL359881.3-201ENST00000602640 1721 ntBASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 RPS8P6-201ENST00000426177 609 ntBASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 AC012640.2-201ENST00000561606 901 ntBASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.29■□□□□ 0.2
RHOXF2Q9BQY4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 SAPCD2P3-201ENST00000455031 850 ntBASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 HNRNPUP1-201ENST00000554987 333 ntBASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 AC024267.1-201ENST00000582320 895 ntBASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 AL358472.4-201ENST00000633140 710 ntBASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
RHOXF2Q9BQY4 DGCR9-201ENST00000609630 2415 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms