Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SMOQ99835 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.08■□□□□ 0.16
SMOQ99835 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.08■□□□□ 0.16
SMOQ99835 LRRC59-203ENST00000576448 1531 ntBASIC16.08■□□□□ 0.16
SMOQ99835 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.08■□□□□ 0.16
SMOQ99835 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SMOQ99835 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.07■□□□□ 0.16
SMOQ99835 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.07■□□□□ 0.16
SMOQ99835 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.07■□□□□ 0.16
SMOQ99835 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.07■□□□□ 0.16
SMOQ99835 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.07■□□□□ 0.16
SMOQ99835 KLF2P4-201ENST00000451959 1225 ntBASIC16.07■□□□□ 0.16
SMOQ99835 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
SMOQ99835 AC022616.1-201ENST00000518688 554 ntBASIC16.07■□□□□ 0.16
SMOQ99835 AC104989.1-201ENST00000519711 778 ntBASIC16.07■□□□□ 0.16
SMOQ99835 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.07■□□□□ 0.16
SMOQ99835 AP000812.2-201ENST00000538934 718 ntBASIC16.07■□□□□ 0.16
SMOQ99835 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SMOQ99835 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.07■□□□□ 0.16
SMOQ99835 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.07■□□□□ 0.16
SMOQ99835 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SMOQ99835 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.07■□□□□ 0.16
SMOQ99835 MIR6805-201ENST00000615055 62 ntBASIC16.07■□□□□ 0.16
SMOQ99835 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.07■□□□□ 0.16
SMOQ99835 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.07■□□□□ 0.16
SMOQ99835 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.07■□□□□ 0.16
SMOQ99835 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SMOQ99835 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.07■□□□□ 0.16
SMOQ99835 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SMOQ99835 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
SMOQ99835 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SMOQ99835 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.07■□□□□ 0.16
SMOQ99835 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.07■□□□□ 0.16
SMOQ99835 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMOQ99835 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SMOQ99835 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.06■□□□□ 0.16
SMOQ99835 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
SMOQ99835 REXO1L2P-201ENST00000425429 2069 ntBASIC16.06■□□□□ 0.16
SMOQ99835 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.06■□□□□ 0.16
SMOQ99835 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SMOQ99835 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.06■□□□□ 0.16
SMOQ99835 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SMOQ99835 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SMOQ99835 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMOQ99835 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SMOQ99835 CNN2P8-201ENST00000421872 913 ntBASIC16.06■□□□□ 0.16
SMOQ99835 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.06■□□□□ 0.16
SMOQ99835 FAM197Y7-201ENST00000432892 766 ntBASIC16.06■□□□□ 0.16
SMOQ99835 C2orf27AP3-201ENST00000434123 579 ntBASIC16.06■□□□□ 0.16
SMOQ99835 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SMOQ99835 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.06■□□□□ 0.16
SMOQ99835 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.06■□□□□ 0.16
SMOQ99835 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.06■□□□□ 0.16
SMOQ99835 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.06■□□□□ 0.16
SMOQ99835 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.06■□□□□ 0.16
SMOQ99835 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.06■□□□□ 0.16
SMOQ99835 DUX4L47-201ENST00000566374 394 ntBASIC16.06■□□□□ 0.16
SMOQ99835 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.06■□□□□ 0.16
SMOQ99835 AL359881.2-201ENST00000602973 570 ntBASIC16.06■□□□□ 0.16
SMOQ99835 AL354718.3-201ENST00000616414 581 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms