Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TRGV9Q99603 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.06□□□□□ -0.48
TRGV9Q99603 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.05□□□□□ -0.48
TRGV9Q99603 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
TRGV9Q99603 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 SNX18-202ENST00000343017 3140 ntBASIC12.05□□□□□ -0.48
TRGV9Q99603 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TRGV9Q99603 AC004461.1-201ENST00000412461 403 ntBASIC12.05□□□□□ -0.48
TRGV9Q99603 GPS2P2-201ENST00000430745 888 ntBASIC12.05□□□□□ -0.48
TRGV9Q99603 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 DNAJB3-201ENST00000446806 729 ntBASIC12.05□□□□□ -0.48
TRGV9Q99603 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.05□□□□□ -0.48
TRGV9Q99603 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.05□□□□□ -0.48
TRGV9Q99603 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
TRGV9Q99603 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.05□□□□□ -0.48
TRGV9Q99603 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 POLD2P1-201ENST00000511220 997 ntBASIC12.05□□□□□ -0.48
TRGV9Q99603 AP000344.2-201ENST00000512987 629 ntBASIC12.05□□□□□ -0.48
TRGV9Q99603 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.05□□□□□ -0.48
TRGV9Q99603 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.05□□□□□ -0.48
TRGV9Q99603 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.05□□□□□ -0.48
TRGV9Q99603 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.05□□□□□ -0.48
TRGV9Q99603 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.05□□□□□ -0.48
TRGV9Q99603 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.05□□□□□ -0.48
TRGV9Q99603 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.05□□□□□ -0.48
TRGV9Q99603 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.05□□□□□ -0.48
TRGV9Q99603 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV9Q99603 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
TRGV9Q99603 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
TRGV9Q99603 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
TRGV9Q99603 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.04□□□□□ -0.48
TRGV9Q99603 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 REXO1L4P-201ENST00000605109 1937 ntBASIC12.04□□□□□ -0.48
TRGV9Q99603 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 CETN4P-206ENST00000642099 2168 ntBASIC12.04□□□□□ -0.48
TRGV9Q99603 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 MIR574-201ENST00000385209 96 ntBASIC12.04□□□□□ -0.48
TRGV9Q99603 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.04□□□□□ -0.48
TRGV9Q99603 SPDYE7P-202ENST00000420373 878 ntBASIC12.04□□□□□ -0.48
TRGV9Q99603 AC015922.1-201ENST00000421102 1152 ntBASIC12.04□□□□□ -0.48
TRGV9Q99603 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
TRGV9Q99603 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.04□□□□□ -0.48
TRGV9Q99603 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.04□□□□□ -0.48
TRGV9Q99603 YBX1P5-201ENST00000509441 847 ntBASIC12.04□□□□□ -0.48
TRGV9Q99603 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.04□□□□□ -0.48
TRGV9Q99603 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.04□□□□□ -0.48
TRGV9Q99603 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.04□□□□□ -0.48
TRGV9Q99603 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
TRGV9Q99603 AC093520.2-201ENST00000561830 333 ntBASIC12.04□□□□□ -0.48
TRGV9Q99603 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.04□□□□□ -0.48
TRGV9Q99603 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.04□□□□□ -0.48
TRGV9Q99603 AC004835.2-201ENST00000603762 682 ntBASIC12.04□□□□□ -0.48
TRGV9Q99603 AC025181.2-201ENST00000606994 802 ntBASIC12.04□□□□□ -0.48
TRGV9Q99603 AL589739.1-201ENST00000607720 493 ntBASIC12.04□□□□□ -0.48
TRGV9Q99603 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV9Q99603 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
TRGV9Q99603 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms