Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 AC023024.2-201ENST00000623561 1993 ntBASIC12.79□□□□□ -0.36
S1PR3Q99500 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
S1PR3Q99500 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 FO538757.1-201ENST00000623083 1397 ntBASIC12.79□□□□□ -0.36
S1PR3Q99500 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.79□□□□□ -0.36
S1PR3Q99500 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.79□□□□□ -0.36
S1PR3Q99500 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
S1PR3Q99500 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
S1PR3Q99500 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
S1PR3Q99500 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
S1PR3Q99500 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
S1PR3Q99500 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.78□□□□□ -0.36
S1PR3Q99500 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.78□□□□□ -0.36
S1PR3Q99500 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
S1PR3Q99500 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 AGAP7P-201ENST00000582299 2062 ntBASIC12.78□□□□□ -0.36
S1PR3Q99500 AGAP14-201ENST00000624701 2060 ntBASIC12.78□□□□□ -0.36
S1PR3Q99500 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.78□□□□□ -0.36
S1PR3Q99500 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.78□□□□□ -0.36
S1PR3Q99500 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.78□□□□□ -0.36
S1PR3Q99500 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.78□□□□□ -0.36
S1PR3Q99500 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.78□□□□□ -0.36
S1PR3Q99500 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 HLA-V-204ENST00000476601 1289 ntBASIC12.78□□□□□ -0.36
S1PR3Q99500 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.78□□□□□ -0.36
S1PR3Q99500 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.78□□□□□ -0.36
S1PR3Q99500 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.78□□□□□ -0.36
S1PR3Q99500 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.78□□□□□ -0.36
S1PR3Q99500 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
S1PR3Q99500 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
S1PR3Q99500 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
S1PR3Q99500 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.78□□□□□ -0.36
S1PR3Q99500 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.78□□□□□ -0.36
S1PR3Q99500 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
S1PR3Q99500 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
S1PR3Q99500 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
S1PR3Q99500 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
S1PR3Q99500 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
S1PR3Q99500 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
S1PR3Q99500 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
S1PR3Q99500 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.78□□□□□ -0.36
S1PR3Q99500 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
S1PR3Q99500 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
S1PR3Q99500 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
S1PR3Q99500 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
S1PR3Q99500 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
S1PR3Q99500 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
S1PR3Q99500 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
S1PR3Q99500 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
S1PR3Q99500 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
S1PR3Q99500 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
S1PR3Q99500 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.77□□□□□ -0.36
S1PR3Q99500 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
S1PR3Q99500 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
S1PR3Q99500 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.77□□□□□ -0.36
S1PR3Q99500 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
S1PR3Q99500 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
S1PR3Q99500 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
S1PR3Q99500 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
S1PR3Q99500 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
S1PR3Q99500 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms