Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.38□□□□□ -0.43
RNF2Q99496 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RNF2Q99496 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
RNF2Q99496 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.38□□□□□ -0.43
RNF2Q99496 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.38□□□□□ -0.43
RNF2Q99496 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
RNF2Q99496 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RNF2Q99496 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
RNF2Q99496 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.38□□□□□ -0.43
RNF2Q99496 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.38□□□□□ -0.43
RNF2Q99496 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.38□□□□□ -0.43
RNF2Q99496 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.38□□□□□ -0.43
RNF2Q99496 FAM8A3P-201ENST00000427218 844 ntBASIC12.38□□□□□ -0.43
RNF2Q99496 SPCS2P4-201ENST00000436160 681 ntBASIC12.38□□□□□ -0.43
RNF2Q99496 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 YBX1P5-201ENST00000509441 847 ntBASIC12.38□□□□□ -0.43
RNF2Q99496 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.38□□□□□ -0.43
RNF2Q99496 AC105233.2-201ENST00000523697 349 ntBASIC12.38□□□□□ -0.43
RNF2Q99496 AF228730.5-201ENST00000530288 346 ntBASIC12.38□□□□□ -0.43
RNF2Q99496 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.38□□□□□ -0.43
RNF2Q99496 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.38□□□□□ -0.43
RNF2Q99496 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.38□□□□□ -0.43
RNF2Q99496 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RNF2Q99496 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RNF2Q99496 AC107918.4-201ENST00000641966 3141 ntBASIC12.38□□□□□ -0.43
RNF2Q99496 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.38□□□□□ -0.43
RNF2Q99496 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RNF2Q99496 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.38□□□□□ -0.43
RNF2Q99496 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RNF2Q99496 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.38□□□□□ -0.43
RNF2Q99496 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.37□□□□□ -0.43
RNF2Q99496 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
RNF2Q99496 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
RNF2Q99496 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.37□□□□□ -0.43
RNF2Q99496 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RNF2Q99496 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RNF2Q99496 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RNF2Q99496 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.37□□□□□ -0.43
RNF2Q99496 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
RNF2Q99496 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RNF2Q99496 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RNF2Q99496 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RNF2Q99496 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.37□□□□□ -0.43
RNF2Q99496 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
RNF2Q99496 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
RNF2Q99496 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.37□□□□□ -0.43
RNF2Q99496 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.37□□□□□ -0.43
RNF2Q99496 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.37□□□□□ -0.43
RNF2Q99496 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.37□□□□□ -0.43
RNF2Q99496 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.37□□□□□ -0.43
RNF2Q99496 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.37□□□□□ -0.43
RNF2Q99496 AL592309.1-201ENST00000443127 649 ntBASIC12.37□□□□□ -0.43
RNF2Q99496 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.37□□□□□ -0.43
RNF2Q99496 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.37□□□□□ -0.43
RNF2Q99496 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.37□□□□□ -0.43
RNF2Q99496 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.37□□□□□ -0.43
RNF2Q99496 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.37□□□□□ -0.43
RNF2Q99496 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.37□□□□□ -0.43
RNF2Q99496 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.37□□□□□ -0.43
RNF2Q99496 AC073389.1-201ENST00000595595 795 ntBASIC12.37□□□□□ -0.43
RNF2Q99496 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.37□□□□□ -0.43
RNF2Q99496 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.37□□□□□ -0.43
RNF2Q99496 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.37□□□□□ -0.43
RNF2Q99496 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RNF2Q99496 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.37□□□□□ -0.43
RNF2Q99496 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
RNF2Q99496 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RNF2Q99496 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms