Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 FAM58CP-201ENST00000435741 640 ntBASIC13.11□□□□□ -0.31
CLCC1Q96S66 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 AL161645.1-201ENST00000622716 1255 ntBASIC13.11□□□□□ -0.31
CLCC1Q96S66 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 OR2I1P-208ENST00000641137 4948 ntBASIC13.1□□□□□ -0.31
CLCC1Q96S66 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.1□□□□□ -0.31
CLCC1Q96S66 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CLCC1Q96S66 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.1□□□□□ -0.31
CLCC1Q96S66 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CLCC1Q96S66 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CLCC1Q96S66 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.1□□□□□ -0.31
CLCC1Q96S66 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CLCC1Q96S66 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 AP000347.1-202ENST00000435868 847 ntBASIC13.1□□□□□ -0.31
CLCC1Q96S66 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CLCC1Q96S66 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.1□□□□□ -0.31
CLCC1Q96S66 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 AC040169.1-201ENST00000565382 521 ntBASIC13.1□□□□□ -0.31
CLCC1Q96S66 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CLCC1Q96S66 WASH6P-202ENST00000359512 1437 ntBASIC13.1□□□□□ -0.31
CLCC1Q96S66 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CLCC1Q96S66 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 AC087481.3-201ENST00000602886 1894 ntBASIC13.1□□□□□ -0.31
CLCC1Q96S66 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CLCC1Q96S66 AL390755.1-201ENST00000623716 2027 ntBASIC13.1□□□□□ -0.31
CLCC1Q96S66 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CLCC1Q96S66 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.1□□□□□ -0.31
CLCC1Q96S66 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLCC1Q96S66 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.09□□□□□ -0.31
CLCC1Q96S66 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms