Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CSMD1Q96PZ7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 GGT3P-204ENST00000453783 1664 ntBASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 AC005324.6-201ENST00000587972 613 ntBASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 AL132994.2-201ENST00000603120 687 ntBASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 AC025262.2-201ENST00000623975 1056 ntBASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 LINC00431-202ENST00000636375 159 ntBASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 E2F3P2-201ENST00000447755 1422 ntBASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 COX20P1-201ENST00000366529 357 ntBASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 AC138466.5-201ENST00000624002 808 ntBASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD1Q96PZ7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 AC092127.1-201ENST00000567093 3455 ntBASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 AC106820.3-201ENST00000561653 397 ntBASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 RPL8P2-201ENST00000430538 502 ntBASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 AC005041.3-201ENST00000606287 649 ntBASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 ENPP7P8-202ENST00000527856 1345 ntBASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CSMD1Q96PZ7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms