Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 IMP3P2-201ENST00000489760 475 ntBASIC16.24■□□□□ 0.19
CASD1Q96PB1 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.24■□□□□ 0.19
CASD1Q96PB1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.24■□□□□ 0.19
CASD1Q96PB1 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.24■□□□□ 0.19
CASD1Q96PB1 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.24■□□□□ 0.19
CASD1Q96PB1 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.24■□□□□ 0.19
CASD1Q96PB1 AP001505.2-201ENST00000616815 443 ntBASIC16.24■□□□□ 0.19
CASD1Q96PB1 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CASD1Q96PB1 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.24■□□□□ 0.19
CASD1Q96PB1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.24■□□□□ 0.19
CASD1Q96PB1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CASD1Q96PB1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASD1Q96PB1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
CASD1Q96PB1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.24■□□□□ 0.19
CASD1Q96PB1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASD1Q96PB1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
CASD1Q96PB1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASD1Q96PB1 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASD1Q96PB1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASD1Q96PB1 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CASD1Q96PB1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASD1Q96PB1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASD1Q96PB1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CASD1Q96PB1 REXO1L4P-201ENST00000605109 1937 ntBASIC16.23■□□□□ 0.19
CASD1Q96PB1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.23■□□□□ 0.19
CASD1Q96PB1 KRT8P19-201ENST00000551916 1455 ntBASIC16.23■□□□□ 0.19
CASD1Q96PB1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CASD1Q96PB1 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.23■□□□□ 0.19
CASD1Q96PB1 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.23■□□□□ 0.19
CASD1Q96PB1 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.23■□□□□ 0.19
CASD1Q96PB1 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CASD1Q96PB1 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.23■□□□□ 0.19
CASD1Q96PB1 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.23■□□□□ 0.19
CASD1Q96PB1 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.23■□□□□ 0.19
CASD1Q96PB1 AL136301.1-201ENST00000615830 422 ntBASIC16.23■□□□□ 0.19
CASD1Q96PB1 AC091812.3-201ENST00000621362 345 ntBASIC16.23■□□□□ 0.19
CASD1Q96PB1 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.23■□□□□ 0.19
CASD1Q96PB1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.23■□□□□ 0.19
CASD1Q96PB1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 AC084018.2-201ENST00000613093 2607 ntBASIC16.23■□□□□ 0.19
CASD1Q96PB1 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.23■□□□□ 0.19
CASD1Q96PB1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.23■□□□□ 0.19
CASD1Q96PB1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
CASD1Q96PB1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.23■□□□□ 0.19
CASD1Q96PB1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CASD1Q96PB1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 AC009093.2-202ENST00000620513 2079 ntBASIC16.22■□□□□ 0.19
CASD1Q96PB1 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 AL391005.1-201ENST00000623953 2435 ntBASIC16.22■□□□□ 0.19
CASD1Q96PB1 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CASD1Q96PB1 AL008707.1-201ENST00000422498 534 ntBASIC16.22■□□□□ 0.19
CASD1Q96PB1 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 RN7SL190P-201ENST00000582519 257 ntBASIC16.22■□□□□ 0.19
CASD1Q96PB1 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 AC138696.2-201ENST00000607376 223 ntBASIC16.22■□□□□ 0.19
CASD1Q96PB1 CU633904.3-201ENST00000624042 1029 ntBASIC16.22■□□□□ 0.19
CASD1Q96PB1 AL162426.1-201ENST00000624141 743 ntBASIC16.22■□□□□ 0.19
CASD1Q96PB1 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.22■□□□□ 0.19
CASD1Q96PB1 AC002472.3-201ENST00000640124 621 ntBASIC16.22■□□□□ 0.19
CASD1Q96PB1 AC004923.1-202ENST00000642106 209 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms