Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SNX27Q96L92 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.57■□□□□ 0.24
SNX27Q96L92 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.57■□□□□ 0.24
SNX27Q96L92 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.57■□□□□ 0.24
SNX27Q96L92 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
SNX27Q96L92 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
SNX27Q96L92 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.56■□□□□ 0.24
SNX27Q96L92 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
SNX27Q96L92 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.56■□□□□ 0.24
SNX27Q96L92 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.56■□□□□ 0.24
SNX27Q96L92 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SNX27Q96L92 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.56■□□□□ 0.24
SNX27Q96L92 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.56■□□□□ 0.24
SNX27Q96L92 AC099336.1-201ENST00000417053 1171 ntBASIC16.56■□□□□ 0.24
SNX27Q96L92 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.56■□□□□ 0.24
SNX27Q96L92 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.56■□□□□ 0.24
SNX27Q96L92 AC108725.1-201ENST00000495472 409 ntBASIC16.56■□□□□ 0.24
SNX27Q96L92 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.56■□□□□ 0.24
SNX27Q96L92 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.56■□□□□ 0.24
SNX27Q96L92 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.56■□□□□ 0.24
SNX27Q96L92 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.56■□□□□ 0.24
SNX27Q96L92 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.56■□□□□ 0.24
SNX27Q96L92 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.56■□□□□ 0.24
SNX27Q96L92 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.56■□□□□ 0.24
SNX27Q96L92 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.56■□□□□ 0.24
SNX27Q96L92 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.56■□□□□ 0.24
SNX27Q96L92 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SNX27Q96L92 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.56■□□□□ 0.24
SNX27Q96L92 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.56■□□□□ 0.24
SNX27Q96L92 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.56■□□□□ 0.24
SNX27Q96L92 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SNX27Q96L92 AC136621.1-201ENST00000624017 2304 ntBASIC16.56■□□□□ 0.24
SNX27Q96L92 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SNX27Q96L92 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SNX27Q96L92 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SNX27Q96L92 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.55■□□□□ 0.24
SNX27Q96L92 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SNX27Q96L92 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.55■□□□□ 0.24
SNX27Q96L92 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 AC112693.3-201ENST00000624819 1983 ntBASIC16.55■□□□□ 0.24
SNX27Q96L92 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.55■□□□□ 0.24
SNX27Q96L92 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SNX27Q96L92 PAUPAR-201ENST00000630360 2965 ntBASIC16.55■□□□□ 0.24
SNX27Q96L92 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.55■□□□□ 0.24
SNX27Q96L92 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SNX27Q96L92 CNN2P8-201ENST00000421872 913 ntBASIC16.55■□□□□ 0.24
SNX27Q96L92 HLA-K-203ENST00000430151 1046 ntBASIC16.55■□□□□ 0.24
SNX27Q96L92 FAM197Y7-201ENST00000432892 766 ntBASIC16.55■□□□□ 0.24
SNX27Q96L92 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.55■□□□□ 0.24
SNX27Q96L92 FO681548.1-201ENST00000455617 1132 ntBASIC16.55■□□□□ 0.24
SNX27Q96L92 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.55■□□□□ 0.24
SNX27Q96L92 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.55■□□□□ 0.24
SNX27Q96L92 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.55■□□□□ 0.24
SNX27Q96L92 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.55■□□□□ 0.24
SNX27Q96L92 AC243960.2-201ENST00000600996 747 ntBASIC16.55■□□□□ 0.24
SNX27Q96L92 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.55■□□□□ 0.24
SNX27Q96L92 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SNX27Q96L92 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.55■□□□□ 0.24
SNX27Q96L92 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNX27Q96L92 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
SNX27Q96L92 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms