Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 AC023274.1-201ENST00000418278 595 ntBASIC13.74□□□□□ -0.21
RFT1Q96AA3 FAM8A3P-201ENST00000427218 844 ntBASIC13.74□□□□□ -0.21
RFT1Q96AA3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 KRT18P3-201ENST00000451602 1288 ntBASIC13.74□□□□□ -0.21
RFT1Q96AA3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 AL135744.1-201ENST00000565098 629 ntBASIC13.74□□□□□ -0.21
RFT1Q96AA3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 AC027601.5-201ENST00000624065 2482 ntBASIC13.74□□□□□ -0.21
RFT1Q96AA3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 REXO1L1P-202ENST00000608646 1974 ntBASIC13.74□□□□□ -0.21
RFT1Q96AA3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 FOXO1B-201ENST00000504678 1527 ntBASIC13.74□□□□□ -0.21
RFT1Q96AA3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 HSPA7-201ENST00000445535 1927 ntBASIC13.73□□□□□ -0.21
RFT1Q96AA3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 MIR940-201ENST00000401276 94 ntBASIC13.73□□□□□ -0.21
RFT1Q96AA3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 RNA5SP410-201ENST00000516285 106 ntBASIC13.73□□□□□ -0.21
RFT1Q96AA3 AC105233.2-201ENST00000523697 349 ntBASIC13.73□□□□□ -0.21
RFT1Q96AA3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 AF228730.5-201ENST00000530288 346 ntBASIC13.73□□□□□ -0.21
RFT1Q96AA3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 AC027307.2-201ENST00000591252 911 ntBASIC13.73□□□□□ -0.21
RFT1Q96AA3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 AC091812.2-201ENST00000619081 385 ntBASIC13.73□□□□□ -0.21
RFT1Q96AA3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RFT1Q96AA3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.73□□□□□ -0.21
RFT1Q96AA3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms