Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 TSPY26P-202ENST00000565928 3884 ntBASIC15.27■□□□□ 0.04
SCAMP4Q969E2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 RNU1-114P-201ENST00000365297 166 ntBASIC15.27■□□□□ 0.04
SCAMP4Q969E2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 AC012441.1-201ENST00000446669 685 ntBASIC15.27■□□□□ 0.04
SCAMP4Q969E2 BCRP2-202ENST00000447763 634 ntBASIC15.27■□□□□ 0.04
SCAMP4Q969E2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 AC022137.2-201ENST00000503482 481 ntBASIC15.27■□□□□ 0.04
SCAMP4Q969E2 BCRP6-201ENST00000510112 632 ntBASIC15.27■□□□□ 0.04
SCAMP4Q969E2 BCRP7-201ENST00000511549 544 ntBASIC15.27■□□□□ 0.04
SCAMP4Q969E2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 AP001889.1-201ENST00000525414 633 ntBASIC15.27■□□□□ 0.04
SCAMP4Q969E2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 AC233724.13-201ENST00000598383 410 ntBASIC15.27■□□□□ 0.04
SCAMP4Q969E2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.27■□□□□ 0.04
SCAMP4Q969E2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 AC046158.3-201ENST00000624947 2558 ntBASIC15.27■□□□□ 0.03
SCAMP4Q969E2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SCAMP4Q969E2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 AC018665.1-201ENST00000622927 1362 ntBASIC15.26■□□□□ 0.03
SCAMP4Q969E2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 AC092384.3-202ENST00000564646 2873 ntBASIC15.26■□□□□ 0.03
SCAMP4Q969E2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 AC104457.1-201ENST00000401024 814 ntBASIC15.26■□□□□ 0.03
SCAMP4Q969E2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 AC112492.5-201ENST00000421897 457 ntBASIC15.26■□□□□ 0.03
SCAMP4Q969E2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 KRT17P8-201ENST00000540749 863 ntBASIC15.26■□□□□ 0.03
SCAMP4Q969E2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 AP005019.2-201ENST00000615104 511 ntBASIC15.26■□□□□ 0.03
SCAMP4Q969E2 AL162274.1-201ENST00000617191 1098 ntBASIC15.26■□□□□ 0.03
SCAMP4Q969E2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.26■□□□□ 0.03
SCAMP4Q969E2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SCAMP4Q969E2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.25■□□□□ 0.03
SCAMP4Q969E2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms