Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.27□□□□□ -0.13
CNOT9Q92600 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT9Q92600 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT9Q92600 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.27□□□□□ -0.13
CNOT9Q92600 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.27□□□□□ -0.13
CNOT9Q92600 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT9Q92600 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CNOT9Q92600 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT9Q92600 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.27□□□□□ -0.13
CNOT9Q92600 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.26□□□□□ -0.13
CNOT9Q92600 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.26□□□□□ -0.13
CNOT9Q92600 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.26□□□□□ -0.13
CNOT9Q92600 AC138969.3-201ENST00000546612 1459 ntBASIC14.26□□□□□ -0.13
CNOT9Q92600 AC138932.2-201ENST00000548268 1459 ntBASIC14.26□□□□□ -0.13
CNOT9Q92600 AC126755.4-201ENST00000549796 1459 ntBASIC14.26□□□□□ -0.13
CNOT9Q92600 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.26□□□□□ -0.13
CNOT9Q92600 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CNOT9Q92600 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.26□□□□□ -0.13
CNOT9Q92600 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.26□□□□□ -0.13
CNOT9Q92600 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CNOT9Q92600 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.26□□□□□ -0.13
CNOT9Q92600 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.26□□□□□ -0.13
CNOT9Q92600 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CNOT9Q92600 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.26□□□□□ -0.13
CNOT9Q92600 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.26□□□□□ -0.13
CNOT9Q92600 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.26□□□□□ -0.13
CNOT9Q92600 AC114501.2-201ENST00000439631 535 ntBASIC14.26□□□□□ -0.13
CNOT9Q92600 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.26□□□□□ -0.13
CNOT9Q92600 KRT18P43-201ENST00000469825 1281 ntBASIC14.26□□□□□ -0.13
CNOT9Q92600 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.26□□□□□ -0.13
CNOT9Q92600 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.26□□□□□ -0.13
CNOT9Q92600 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 AC025181.2-201ENST00000606994 802 ntBASIC14.26□□□□□ -0.13
CNOT9Q92600 GPALPP1-207ENST00000611650 899 ntBASIC14.26□□□□□ -0.13
CNOT9Q92600 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CNOT9Q92600 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.26□□□□□ -0.13
CNOT9Q92600 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CNOT9Q92600 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CNOT9Q92600 CICP4-201ENST00000447359 2812 ntBASIC14.26□□□□□ -0.13
CNOT9Q92600 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.26□□□□□ -0.13
CNOT9Q92600 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CNOT9Q92600 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CNOT9Q92600 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.25□□□□□ -0.13
CNOT9Q92600 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.25□□□□□ -0.13
CNOT9Q92600 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CNOT9Q92600 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.25□□□□□ -0.13
CNOT9Q92600 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT9Q92600 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CNOT9Q92600 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.25□□□□□ -0.13
CNOT9Q92600 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.25□□□□□ -0.13
CNOT9Q92600 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.25□□□□□ -0.13
CNOT9Q92600 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.25□□□□□ -0.13
CNOT9Q92600 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.25□□□□□ -0.13
CNOT9Q92600 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CNOT9Q92600 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.25□□□□□ -0.13
CNOT9Q92600 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.25□□□□□ -0.13
CNOT9Q92600 TIMM17BP1-201ENST00000545713 516 ntBASIC14.25□□□□□ -0.13
CNOT9Q92600 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.25□□□□□ -0.13
CNOT9Q92600 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.25□□□□□ -0.13
CNOT9Q92600 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CNOT9Q92600 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.25□□□□□ -0.13
CNOT9Q92600 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.25□□□□□ -0.13
CNOT9Q92600 AL390955.2-201ENST00000603032 514 ntBASIC14.25□□□□□ -0.13
CNOT9Q92600 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms