Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 TOMM22P5-201ENST00000416399 439 ntBASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 KRT18P43-201ENST00000469825 1281 ntBASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 AL844908.2-201ENST00000609461 460 ntBASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 AC139749.1-202ENST00000617529 3139 ntBASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC83Q8IWF9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC83Q8IWF9 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC83Q8IWF9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC83Q8IWF9 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.14■□□□□ 0.5
CCDC83Q8IWF9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC83Q8IWF9 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC83Q8IWF9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CCDC83Q8IWF9 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 TREML5P-201ENST00000421694 576 ntBASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 AC107890.1-201ENST00000422478 521 ntBASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 AC025678.2-201ENST00000562061 970 ntBASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 AC140878.1-201ENST00000565277 250 ntBASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 AC011467.4-201ENST00000594891 528 ntBASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC83Q8IWF9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 SDHAP3-202ENST00000515467 728 ntBASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC83Q8IWF9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms