Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 IER3-202ENST00000376377 1350 ntBASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 AC055811.4-201ENST00000624039 1754 ntBASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 AC093724.1-201ENST00000448659 1027 ntBASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 RPS15P9-201ENST00000494093 319 ntBASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 AC091076.1-201ENST00000610741 619 ntBASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 AC073548.1-201ENST00000624088 1882 ntBASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LYSMD2Q8IV50 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LYSMD2Q8IV50 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LYSMD2Q8IV50 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LYSMD2Q8IV50 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.58□□□□□ -0.23
LYSMD2Q8IV50 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LYSMD2Q8IV50 KRT8P24-201ENST00000560290 1559 ntBASIC13.58□□□□□ -0.23
LYSMD2Q8IV50 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
LYSMD2Q8IV50 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LYSMD2Q8IV50 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.58□□□□□ -0.23
LYSMD2Q8IV50 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 AC016397.2-201ENST00000624848 1985 ntBASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 AL732292.2-201ENST00000609649 430 ntBASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms