Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 MYO15B-237ENST00000642007 4893 ntBASIC15.66■□□□□ 0.1
PACS2Q86VP3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
PACS2Q86VP3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.66■□□□□ 0.1
PACS2Q86VP3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PACS2Q86VP3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PACS2Q86VP3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC15.66■□□□□ 0.1
PACS2Q86VP3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PACS2Q86VP3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.66■□□□□ 0.1
PACS2Q86VP3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.66■□□□□ 0.1
PACS2Q86VP3 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.66■□□□□ 0.1
PACS2Q86VP3 RNA5SP416-201ENST00000516838 111 ntBASIC15.66■□□□□ 0.1
PACS2Q86VP3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
PACS2Q86VP3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.66■□□□□ 0.1
PACS2Q86VP3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PACS2Q86VP3 AL353729.2-201ENST00000605859 1249 ntBASIC15.66■□□□□ 0.1
PACS2Q86VP3 AC004790.2-201ENST00000623588 572 ntBASIC15.66■□□□□ 0.1
PACS2Q86VP3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.66■□□□□ 0.1
PACS2Q86VP3 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.66■□□□□ 0.1
PACS2Q86VP3 ZBED1P1-201ENST00000502364 1930 ntBASIC15.66■□□□□ 0.1
PACS2Q86VP3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 AP001267.2-201ENST00000532619 2086 ntBASIC15.66■□□□□ 0.1
PACS2Q86VP3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.66■□□□□ 0.1
PACS2Q86VP3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PACS2Q86VP3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 AC131902.2-201ENST00000566892 2172 ntBASIC15.65■□□□□ 0.1
PACS2Q86VP3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 KRT18P3-201ENST00000451602 1288 ntBASIC15.65■□□□□ 0.1
PACS2Q86VP3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 AC010654.1-201ENST00000615722 808 ntBASIC15.65■□□□□ 0.1
PACS2Q86VP3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 AC027281.2-201ENST00000623856 713 ntBASIC15.65■□□□□ 0.1
PACS2Q86VP3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PACS2Q86VP3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 PMS2P7-201ENST00000506558 1336 ntBASIC15.65■□□□□ 0.1
PACS2Q86VP3 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC15.65■□□□□ 0.1
PACS2Q86VP3 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
PACS2Q86VP3 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.64■□□□□ 0.1
PACS2Q86VP3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
PACS2Q86VP3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
PACS2Q86VP3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.64■□□□□ 0.09
PACS2Q86VP3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PACS2Q86VP3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PACS2Q86VP3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms