Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 AL589702.1-201ENST00000641229 1509 ntBASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 AC254562.1-201ENST00000417586 456 ntBASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 SNHG9-202ENST00000564014 471 ntBASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 AP000842.3-202ENST00000569238 1080 ntBASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 AC055717.3-201ENST00000622967 595 ntBASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 AL513210.1-201ENST00000629608 234 ntBASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM53Q6P2H8 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 AJ011931.1-201ENST00000618749 2492 ntBASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 KRT18P32-201ENST00000424695 1287 ntBASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 AC004967.1-201ENST00000453589 447 ntBASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM53Q6P2H8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms