Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 MIR1202-201ENST00000408529 83 ntBASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 STK33P1-201ENST00000423835 1218 ntBASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 AP001582.1-201ENST00000525856 295 ntBASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTC1Q2NKJ3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.46■□□□□ 0.22
CTC1Q2NKJ3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CTC1Q2NKJ3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CTC1Q2NKJ3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 POM121L10P-201ENST00000436994 1285 ntBASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 RPS2P36-201ENST00000456516 831 ntBASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 TMEM198B-204ENST00000484016 896 ntBASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 KRT18P25-201ENST00000508931 1278 ntBASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 SPCS2P2-201ENST00000603270 608 ntBASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 AC097359.3-201ENST00000603982 1210 ntBASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 AP001002.2-201ENST00000625137 386 ntBASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 PPT1-215ENST00000641471 2368 ntBASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CTC1Q2NKJ3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 GAPDHP40-201ENST00000505218 1006 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms