Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 BNIP3P29-201ENST00000598302 571 ntBASIC13.69□□□□□ -0.22
NKX6-1P78426 AL450472.2-201ENST00000603663 1156 ntBASIC13.69□□□□□ -0.22
NKX6-1P78426 TMEM261P1-201ENST00000604899 340 ntBASIC13.69□□□□□ -0.22
NKX6-1P78426 AC011447.5-201ENST00000616168 564 ntBASIC13.69□□□□□ -0.22
NKX6-1P78426 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NKX6-1P78426 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NKX6-1P78426 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX6-1P78426 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX6-1P78426 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.68□□□□□ -0.22
NKX6-1P78426 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX6-1P78426 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-1P78426 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-1P78426 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-1P78426 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NKX6-1P78426 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.68□□□□□ -0.22
NKX6-1P78426 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-1P78426 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.68□□□□□ -0.22
NKX6-1P78426 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX6-1P78426 AC098850.1-201ENST00000419919 790 ntBASIC13.68□□□□□ -0.22
NKX6-1P78426 AL589987.1-201ENST00000453380 819 ntBASIC13.68□□□□□ -0.22
NKX6-1P78426 CROCCP4-201ENST00000457096 498 ntBASIC13.68□□□□□ -0.22
NKX6-1P78426 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX6-1P78426 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX6-1P78426 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX6-1P78426 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-1P78426 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.68□□□□□ -0.22
NKX6-1P78426 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.68□□□□□ -0.22
NKX6-1P78426 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
NKX6-1P78426 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.68□□□□□ -0.22
NKX6-1P78426 HNRNPUP1-201ENST00000554987 333 ntBASIC13.68□□□□□ -0.22
NKX6-1P78426 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.68□□□□□ -0.22
NKX6-1P78426 RRP7BP-205ENST00000566851 833 ntBASIC13.68□□□□□ -0.22
NKX6-1P78426 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.68□□□□□ -0.22
NKX6-1P78426 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-1P78426 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.68□□□□□ -0.22
NKX6-1P78426 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NKX6-1P78426 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NKX6-1P78426 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
NKX6-1P78426 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NKX6-1P78426 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NKX6-1P78426 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX6-1P78426 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.68□□□□□ -0.22
NKX6-1P78426 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NKX6-1P78426 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-1P78426 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NKX6-1P78426 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX6-1P78426 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-1P78426 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-1P78426 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NKX6-1P78426 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
NKX6-1P78426 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 AC074338.1-201ENST00000416825 156 ntBASIC13.67□□□□□ -0.22
NKX6-1P78426 ACTBP11-201ENST00000436287 1126 ntBASIC13.67□□□□□ -0.22
NKX6-1P78426 TARDBPP1-201ENST00000442013 1203 ntBASIC13.67□□□□□ -0.22
NKX6-1P78426 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NKX6-1P78426 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-1P78426 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NKX6-1P78426 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-1P78426 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms