Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.15■□□□□ 0.18
IRX4P78413 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.15■□□□□ 0.18
IRX4P78413 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.15■□□□□ 0.18
IRX4P78413 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IRX4P78413 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX4P78413 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
IRX4P78413 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
IRX4P78413 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.14■□□□□ 0.17
IRX4P78413 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
IRX4P78413 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
IRX4P78413 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
IRX4P78413 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX4P78413 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX4P78413 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX4P78413 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX4P78413 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX4P78413 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
IRX4P78413 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX4P78413 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.14■□□□□ 0.17
IRX4P78413 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX4P78413 TPRX2P-201ENST00000535362 881 ntBASIC16.14■□□□□ 0.17
IRX4P78413 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX4P78413 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX4P78413 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX4P78413 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.14■□□□□ 0.17
IRX4P78413 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX4P78413 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.14■□□□□ 0.17
IRX4P78413 CTBP2P3-201ENST00000585629 1255 ntBASIC16.14■□□□□ 0.17
IRX4P78413 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.14■□□□□ 0.17
IRX4P78413 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.14■□□□□ 0.17
IRX4P78413 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.14■□□□□ 0.17
IRX4P78413 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX4P78413 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
IRX4P78413 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
IRX4P78413 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
IRX4P78413 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
IRX4P78413 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
IRX4P78413 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
IRX4P78413 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
IRX4P78413 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.14■□□□□ 0.17
IRX4P78413 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 REXO1L6P-201ENST00000603433 1515 ntBASIC16.14■□□□□ 0.17
IRX4P78413 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IRX4P78413 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.14■□□□□ 0.17
IRX4P78413 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.14■□□□□ 0.17
IRX4P78413 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.13■□□□□ 0.17
IRX4P78413 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
IRX4P78413 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
IRX4P78413 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.13■□□□□ 0.17
IRX4P78413 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
IRX4P78413 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.13■□□□□ 0.17
IRX4P78413 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.13■□□□□ 0.17
IRX4P78413 AC119751.2-201ENST00000504529 210 ntBASIC16.13■□□□□ 0.17
IRX4P78413 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.13■□□□□ 0.17
IRX4P78413 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.13■□□□□ 0.17
IRX4P78413 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
IRX4P78413 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.13■□□□□ 0.17
IRX4P78413 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.13■□□□□ 0.17
IRX4P78413 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.13■□□□□ 0.17
IRX4P78413 AC084346.2-201ENST00000607097 949 ntBASIC16.13■□□□□ 0.17
IRX4P78413 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.13■□□□□ 0.17
IRX4P78413 AC099568.2-201ENST00000609194 695 ntBASIC16.13■□□□□ 0.17
IRX4P78413 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.13■□□□□ 0.17
IRX4P78413 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.13■□□□□ 0.17
IRX4P78413 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.13■□□□□ 0.17
IRX4P78413 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IRX4P78413 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
IRX4P78413 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms