Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 AL512638.1-201ENST00000457493 794 ntBASIC13.49□□□□□ -0.25
HIST1H3AP68431 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
HIST1H3AP68431 ACE3P-201ENST00000423435 1973 ntBASIC13.49□□□□□ -0.25
HIST1H3AP68431 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HIST1H3AP68431 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 AC104794.3-201ENST00000566840 1248 ntBASIC13.48□□□□□ -0.25
HIST1H3AP68431 SAMD11P1-201ENST00000571429 661 ntBASIC13.48□□□□□ -0.25
HIST1H3AP68431 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.48□□□□□ -0.25
HIST1H3AP68431 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.48□□□□□ -0.25
HIST1H3AP68431 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.48□□□□□ -0.25
HIST1H3AP68431 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.48□□□□□ -0.25
HIST1H3AP68431 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.48□□□□□ -0.25
HIST1H3AP68431 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HIST1H3AP68431 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HIST1H3AP68431 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 AJ011931.1-201ENST00000618749 2492 ntBASIC13.47□□□□□ -0.25
HIST1H3AP68431 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H3AP68431 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms