Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
YBX1P67809 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.03■□□□□ -0
YBX1P67809 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
YBX1P67809 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
YBX1P67809 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.03■□□□□ -0
YBX1P67809 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.03■□□□□ -0
YBX1P67809 RN7SL399P-201ENST00000471648 279 ntBASIC15.03■□□□□ -0
YBX1P67809 AC093004.1-201ENST00000508850 424 ntBASIC15.03■□□□□ -0
YBX1P67809 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.03■□□□□ -0
YBX1P67809 AC008494.3-201ENST00000606615 944 ntBASIC15.03■□□□□ -0
YBX1P67809 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.03■□□□□ -0
YBX1P67809 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
YBX1P67809 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
YBX1P67809 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
YBX1P67809 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
YBX1P67809 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.03■□□□□ -0
YBX1P67809 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
YBX1P67809 AC148477.4-201ENST00000613430 1793 ntBASIC15.03■□□□□ -0
YBX1P67809 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
YBX1P67809 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.03■□□□□ -0
YBX1P67809 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
YBX1P67809 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
YBX1P67809 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
YBX1P67809 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.02■□□□□ -0
YBX1P67809 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
YBX1P67809 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
YBX1P67809 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
YBX1P67809 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
YBX1P67809 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.02■□□□□ -0
YBX1P67809 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.02■□□□□ -0
YBX1P67809 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.02■□□□□ -0
YBX1P67809 DFFBP1-201ENST00000433250 979 ntBASIC15.02■□□□□ -0
YBX1P67809 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.02■□□□□ -0
YBX1P67809 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.02■□□□□ -0
YBX1P67809 CRB3P1-201ENST00000449338 276 ntBASIC15.02■□□□□ -0
YBX1P67809 KRT18P43-201ENST00000469825 1281 ntBASIC15.02■□□□□ -0
YBX1P67809 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.02■□□□□ -0
YBX1P67809 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.02■□□□□ -0
YBX1P67809 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.02■□□□□ -0
YBX1P67809 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.02■□□□□ -0
YBX1P67809 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.02■□□□□ -0
YBX1P67809 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.02■□□□□ -0
YBX1P67809 AL662799.1-202ENST00000614205 422 ntBASIC15.02■□□□□ -0
YBX1P67809 AC007431.3-201ENST00000623221 587 ntBASIC15.02■□□□□ -0
YBX1P67809 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
YBX1P67809 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
YBX1P67809 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.02□□□□□ -0.01
YBX1P67809 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
YBX1P67809 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
YBX1P67809 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
YBX1P67809 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
YBX1P67809 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
YBX1P67809 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
YBX1P67809 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
YBX1P67809 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
YBX1P67809 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
YBX1P67809 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
YBX1P67809 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
YBX1P67809 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
YBX1P67809 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
YBX1P67809 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.02□□□□□ -0.01
YBX1P67809 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.02□□□□□ -0.01
YBX1P67809 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
YBX1P67809 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.01□□□□□ -0.01
YBX1P67809 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
YBX1P67809 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
YBX1P67809 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
YBX1P67809 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
YBX1P67809 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.01□□□□□ -0.01
YBX1P67809 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms