Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CDC42P60953 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.16□□□□□ -0.14
CDC42P60953 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 AC136759.1-202ENST00000530858 2194 ntBASIC14.16□□□□□ -0.14
CDC42P60953 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDC42P60953 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CDC42P60953 AC113367.3-201ENST00000508316 1912 ntBASIC14.16□□□□□ -0.14
CDC42P60953 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.16□□□□□ -0.14
CDC42P60953 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.16□□□□□ -0.14
CDC42P60953 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.16□□□□□ -0.14
CDC42P60953 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.16□□□□□ -0.14
CDC42P60953 FAAHP1-202ENST00000446499 1238 ntBASIC14.16□□□□□ -0.14
CDC42P60953 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.16□□□□□ -0.14
CDC42P60953 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.16□□□□□ -0.14
CDC42P60953 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.16□□□□□ -0.14
CDC42P60953 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.16□□□□□ -0.14
CDC42P60953 AC112191.1-201ENST00000523689 701 ntBASIC14.16□□□□□ -0.14
CDC42P60953 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 KRT19P2-202ENST00000557173 1012 ntBASIC14.16□□□□□ -0.14
CDC42P60953 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDC42P60953 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.16□□□□□ -0.14
CDC42P60953 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.16□□□□□ -0.14
CDC42P60953 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDC42P60953 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDC42P60953 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42P60953 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CDC42P60953 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CDC42P60953 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.15□□□□□ -0.14
CDC42P60953 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.15□□□□□ -0.14
CDC42P60953 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.15□□□□□ -0.14
CDC42P60953 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.15□□□□□ -0.14
CDC42P60953 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CDC42P60953 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 AC004870.1-201ENST00000315132 882 ntBASIC14.15□□□□□ -0.14
CDC42P60953 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.15□□□□□ -0.14
CDC42P60953 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 UNC93B7-201ENST00000509439 705 ntBASIC14.15□□□□□ -0.14
CDC42P60953 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.15□□□□□ -0.14
CDC42P60953 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.15□□□□□ -0.14
CDC42P60953 AL773604.1-201ENST00000617417 272 ntBASIC14.15□□□□□ -0.14
CDC42P60953 AL691432.3-201ENST00000621860 400 ntBASIC14.15□□□□□ -0.14
CDC42P60953 AC008267.7-201ENST00000624570 1194 ntBASIC14.15□□□□□ -0.14
CDC42P60953 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.15□□□□□ -0.14
CDC42P60953 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CDC42P60953 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.15□□□□□ -0.14
CDC42P60953 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42P60953 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC42P60953 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms