Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VSX2P58304 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.79□□□□□ -0.04
VSX2P58304 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
VSX2P58304 TTTY23B-201ENST00000442790 549 ntBASIC14.79□□□□□ -0.04
VSX2P58304 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.79□□□□□ -0.04
VSX2P58304 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.79□□□□□ -0.04
VSX2P58304 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.79□□□□□ -0.04
VSX2P58304 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
VSX2P58304 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.79□□□□□ -0.04
VSX2P58304 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.79□□□□□ -0.04
VSX2P58304 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.79□□□□□ -0.04
VSX2P58304 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.79□□□□□ -0.04
VSX2P58304 AC010319.3-201ENST00000597028 470 ntBASIC14.79□□□□□ -0.04
VSX2P58304 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
VSX2P58304 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.79□□□□□ -0.04
VSX2P58304 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.79□□□□□ -0.04
VSX2P58304 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VSX2P58304 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.78□□□□□ -0.04
VSX2P58304 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.78□□□□□ -0.04
VSX2P58304 AC087481.3-201ENST00000602886 1894 ntBASIC14.78□□□□□ -0.04
VSX2P58304 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VSX2P58304 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VSX2P58304 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
VSX2P58304 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.78□□□□□ -0.04
VSX2P58304 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
VSX2P58304 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.78□□□□□ -0.04
VSX2P58304 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.78□□□□□ -0.04
VSX2P58304 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.78□□□□□ -0.04
VSX2P58304 AC007389.4-201ENST00000454674 793 ntBASIC14.78□□□□□ -0.04
VSX2P58304 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.78□□□□□ -0.04
VSX2P58304 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.78□□□□□ -0.04
VSX2P58304 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.78□□□□□ -0.04
VSX2P58304 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.78□□□□□ -0.04
VSX2P58304 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.78□□□□□ -0.04
VSX2P58304 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.78□□□□□ -0.04
VSX2P58304 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
VSX2P58304 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.78□□□□□ -0.04
VSX2P58304 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
VSX2P58304 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
VSX2P58304 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
VSX2P58304 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
VSX2P58304 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
VSX2P58304 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.78□□□□□ -0.04
VSX2P58304 AC020658.6-201ENST00000623564 1870 ntBASIC14.78□□□□□ -0.04
VSX2P58304 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VSX2P58304 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
VSX2P58304 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.77□□□□□ -0.04
VSX2P58304 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VSX2P58304 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VSX2P58304 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VSX2P58304 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
VSX2P58304 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
VSX2P58304 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VSX2P58304 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
VSX2P58304 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.77□□□□□ -0.04
VSX2P58304 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.77□□□□□ -0.05
VSX2P58304 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VSX2P58304 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.77□□□□□ -0.05
VSX2P58304 ENPP7P5-201ENST00000541031 1031 ntBASIC14.77□□□□□ -0.05
VSX2P58304 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.77□□□□□ -0.05
VSX2P58304 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VSX2P58304 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.77□□□□□ -0.05
VSX2P58304 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.77□□□□□ -0.05
VSX2P58304 AC093813.1-201ENST00000605066 256 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms