Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN20P56880 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN20P56880 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN20P56880 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
CLDN20P56880 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN20P56880 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN20P56880 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.2□□□□□ -0.14
CLDN20P56880 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.2□□□□□ -0.14
CLDN20P56880 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.2□□□□□ -0.14
CLDN20P56880 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN20P56880 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN20P56880 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN20P56880 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLDN20P56880 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CLDN20P56880 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN20P56880 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLDN20P56880 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CLDN20P56880 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLDN20P56880 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.19□□□□□ -0.14
CLDN20P56880 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CLDN20P56880 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CLDN20P56880 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN20P56880 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLDN20P56880 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN20P56880 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CLDN20P56880 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLDN20P56880 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN20P56880 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 MEIS3P1-201ENST00000495167 958 ntBASIC14.19□□□□□ -0.14
CLDN20P56880 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.19□□□□□ -0.14
CLDN20P56880 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLDN20P56880 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN20P56880 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CLDN20P56880 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CLDN20P56880 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.19□□□□□ -0.14
CLDN20P56880 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLDN20P56880 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN20P56880 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
CLDN20P56880 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN20P56880 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN20P56880 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN20P56880 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN20P56880 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CLDN20P56880 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN20P56880 AC015922.1-201ENST00000421102 1152 ntBASIC14.18□□□□□ -0.14
CLDN20P56880 DFFBP1-201ENST00000433250 979 ntBASIC14.18□□□□□ -0.14
CLDN20P56880 COX20P2-201ENST00000452636 358 ntBASIC14.18□□□□□ -0.14
CLDN20P56880 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN20P56880 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN20P56880 AC093004.1-201ENST00000508850 424 ntBASIC14.18□□□□□ -0.14
CLDN20P56880 SLED1-202ENST00000512051 380 ntBASIC14.18□□□□□ -0.14
CLDN20P56880 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDN20P56880 API5-211ENST00000534695 560 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN20P56880 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN20P56880 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDN20P56880 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN20P56880 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDN20P56880 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.18□□□□□ -0.14
CLDN20P56880 AL662799.1-202ENST00000614205 422 ntBASIC14.18□□□□□ -0.14
CLDN20P56880 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CLDN20P56880 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms