Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.38□□□□□ -0.11
PER3P56645 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.38□□□□□ -0.11
PER3P56645 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PER3P56645 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
PER3P56645 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.38□□□□□ -0.11
PER3P56645 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.38□□□□□ -0.11
PER3P56645 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.38□□□□□ -0.11
PER3P56645 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.38□□□□□ -0.11
PER3P56645 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.38□□□□□ -0.11
PER3P56645 KLF2P4-201ENST00000451959 1225 ntBASIC14.38□□□□□ -0.11
PER3P56645 AC119751.2-201ENST00000504529 210 ntBASIC14.38□□□□□ -0.11
PER3P56645 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PER3P56645 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.38□□□□□ -0.11
PER3P56645 AC092337.1-201ENST00000568699 1129 ntBASIC14.38□□□□□ -0.11
PER3P56645 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.38□□□□□ -0.11
PER3P56645 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.38□□□□□ -0.11
PER3P56645 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.38□□□□□ -0.11
PER3P56645 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PER3P56645 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PER3P56645 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PER3P56645 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PER3P56645 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PER3P56645 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PER3P56645 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.37□□□□□ -0.11
PER3P56645 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 AC092933.1-201ENST00000393644 945 ntBASIC14.37□□□□□ -0.11
PER3P56645 BCYRN1-201ENST00000418539 200 ntBASIC14.37□□□□□ -0.11
PER3P56645 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.37□□□□□ -0.11
PER3P56645 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 BNIP3P42-201ENST00000454982 569 ntBASIC14.37□□□□□ -0.11
PER3P56645 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.37□□□□□ -0.11
PER3P56645 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.37□□□□□ -0.11
PER3P56645 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.37□□□□□ -0.11
PER3P56645 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PER3P56645 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.37□□□□□ -0.11
PER3P56645 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.37□□□□□ -0.11
PER3P56645 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.37□□□□□ -0.11
PER3P56645 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.37□□□□□ -0.11
PER3P56645 AC010319.3-201ENST00000597028 470 ntBASIC14.37□□□□□ -0.11
PER3P56645 BNIP3P29-201ENST00000598302 571 ntBASIC14.37□□□□□ -0.11
PER3P56645 AC233724.13-201ENST00000598383 410 ntBASIC14.37□□□□□ -0.11
PER3P56645 AC011447.5-201ENST00000616168 564 ntBASIC14.37□□□□□ -0.11
PER3P56645 MIR6787-201ENST00000616675 61 ntBASIC14.37□□□□□ -0.11
PER3P56645 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PER3P56645 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
PER3P56645 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PER3P56645 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
PER3P56645 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
PER3P56645 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
PER3P56645 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PER3P56645 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.37□□□□□ -0.11
PER3P56645 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PER3P56645 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 AC023157.3-201ENST00000619086 2088 ntBASIC14.37□□□□□ -0.11
PER3P56645 AC005089.1-201ENST00000619486 2241 ntBASIC14.37□□□□□ -0.11
PER3P56645 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PER3P56645 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms