Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.93□□□□□ -0.18
SUMO3P55854 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
SUMO3P55854 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.93□□□□□ -0.18
SUMO3P55854 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SUMO3P55854 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.92□□□□□ -0.18
SUMO3P55854 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SUMO3P55854 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
SUMO3P55854 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.92□□□□□ -0.18
SUMO3P55854 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.92□□□□□ -0.18
SUMO3P55854 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SUMO3P55854 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.92□□□□□ -0.18
SUMO3P55854 DGCR5-201ENST00000399539 862 ntBASIC13.92□□□□□ -0.18
SUMO3P55854 AL139094.1-201ENST00000405549 1188 ntBASIC13.92□□□□□ -0.18
SUMO3P55854 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.92□□□□□ -0.18
SUMO3P55854 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.92□□□□□ -0.18
SUMO3P55854 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SUMO3P55854 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SUMO3P55854 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.92□□□□□ -0.18
SUMO3P55854 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.92□□□□□ -0.18
SUMO3P55854 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.92□□□□□ -0.18
SUMO3P55854 AP000845.1-201ENST00000581677 2131 ntBASIC13.92□□□□□ -0.18
SUMO3P55854 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.92□□□□□ -0.18
SUMO3P55854 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.92□□□□□ -0.18
SUMO3P55854 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SUMO3P55854 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.92□□□□□ -0.18
SUMO3P55854 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.92□□□□□ -0.18
SUMO3P55854 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
SUMO3P55854 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.92□□□□□ -0.18
SUMO3P55854 AL033527.5-201ENST00000641382 801 ntBASIC13.92□□□□□ -0.18
SUMO3P55854 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SUMO3P55854 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
SUMO3P55854 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.92□□□□□ -0.18
SUMO3P55854 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SUMO3P55854 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.92□□□□□ -0.18
SUMO3P55854 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SUMO3P55854 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SUMO3P55854 REXO1L2P-201ENST00000425429 2069 ntBASIC13.92□□□□□ -0.18
SUMO3P55854 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SUMO3P55854 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.92□□□□□ -0.18
SUMO3P55854 MST1L-201ENST00000442552 2185 ntBASIC13.92□□□□□ -0.18
SUMO3P55854 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SUMO3P55854 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.92□□□□□ -0.18
SUMO3P55854 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SUMO3P55854 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SUMO3P55854 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SUMO3P55854 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SUMO3P55854 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.91□□□□□ -0.18
SUMO3P55854 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SUMO3P55854 KRT8P14-201ENST00000414254 1442 ntBASIC13.91□□□□□ -0.18
SUMO3P55854 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SUMO3P55854 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SUMO3P55854 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SUMO3P55854 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.91□□□□□ -0.18
SUMO3P55854 AGAP7P-201ENST00000582299 2062 ntBASIC13.91□□□□□ -0.18
SUMO3P55854 AGAP14-201ENST00000624701 2060 ntBASIC13.91□□□□□ -0.18
SUMO3P55854 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
SUMO3P55854 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SUMO3P55854 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SUMO3P55854 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SUMO3P55854 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SUMO3P55854 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SUMO3P55854 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SUMO3P55854 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SUMO3P55854 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SUMO3P55854 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.91□□□□□ -0.18
SUMO3P55854 AC011495.1-201ENST00000498085 584 ntBASIC13.91□□□□□ -0.18
SUMO3P55854 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.91□□□□□ -0.18
SUMO3P55854 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.91□□□□□ -0.18
SUMO3P55854 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SUMO3P55854 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SUMO3P55854 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms