Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH13P55290 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH13P55290 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH13P55290 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH13P55290 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CDH13P55290 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH13P55290 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH13P55290 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH13P55290 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDH13P55290 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH13P55290 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CDH13P55290 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH13P55290 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH13P55290 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDH13P55290 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH13P55290 AC254562.1-201ENST00000417586 456 ntBASIC15.13■□□□□ 0.01
CDH13P55290 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH13P55290 CNN2P11-201ENST00000429351 262 ntBASIC15.13■□□□□ 0.01
CDH13P55290 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH13P55290 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.13■□□□□ 0.01
CDH13P55290 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CDH13P55290 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 AC092865.5-201ENST00000545435 363 ntBASIC15.13■□□□□ 0.01
CDH13P55290 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDH13P55290 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDH13P55290 AC015910.1-201ENST00000579400 975 ntBASIC15.13■□□□□ 0.01
CDH13P55290 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH13P55290 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 AC027612.4-201ENST00000605371 583 ntBASIC15.13■□□□□ 0.01
CDH13P55290 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDH13P55290 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH13P55290 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH13P55290 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CDH13P55290 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH13P55290 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH13P55290 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH13P55290 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH13P55290 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH13P55290 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH13P55290 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH13P55290 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH13P55290 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH13P55290 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH13P55290 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH13P55290 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH13P55290 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH13P55290 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH13P55290 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH13P55290 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH13P55290 AC005912.2-201ENST00000619492 2400 ntBASIC15.12■□□□□ 0.01
CDH13P55290 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CDH13P55290 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CDH13P55290 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH13P55290 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH13P55290 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH13P55290 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CDH13P55290 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH13P55290 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH13P55290 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH13P55290 AC069262.1-201ENST00000539058 672 ntBASIC15.12■□□□□ 0.01
CDH13P55290 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.12■□□□□ 0.01
CDH13P55290 AL512356.2-201ENST00000546955 174 ntBASIC15.12■□□□□ 0.01
CDH13P55290 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH13P55290 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.12■□□□□ 0.01
CDH13P55290 LINC01115-203ENST00000606068 577 ntBASIC15.12■□□□□ 0.01
CDH13P55290 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH13P55290 AC007191.1-201ENST00000623179 2995 ntBASIC15.12■□□□□ 0.01
CDH13P55290 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.12■□□□□ 0.01
CDH13P55290 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.12■□□□□ 0.01
CDH13P55290 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDH13P55290 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH13P55290 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms