Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CDH4P55283 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH4P55283 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.71■□□□□ 0.1
CDH4P55283 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.71■□□□□ 0.1
CDH4P55283 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH4P55283 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CDH4P55283 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CDH4P55283 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CDH4P55283 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDH4P55283 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH4P55283 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH4P55283 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CDH4P55283 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDH4P55283 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH4P55283 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDH4P55283 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CDH4P55283 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDH4P55283 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.7■□□□□ 0.1
CDH4P55283 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 AC079776.1-201ENST00000401540 1152 ntBASIC15.7■□□□□ 0.1
CDH4P55283 BOLA2P3-201ENST00000404566 256 ntBASIC15.7■□□□□ 0.1
CDH4P55283 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.7■□□□□ 0.1
CDH4P55283 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.7■□□□□ 0.1
CDH4P55283 AC106760.1-201ENST00000508690 800 ntBASIC15.7■□□□□ 0.1
CDH4P55283 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.7■□□□□ 0.1
CDH4P55283 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.7■□□□□ 0.1
CDH4P55283 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CDH4P55283 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH4P55283 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH4P55283 CICP6-201ENST00000457191 2729 ntBASIC15.7■□□□□ 0.1
CDH4P55283 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH4P55283 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH4P55283 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH4P55283 AL162727.3-201ENST00000635661 2787 ntBASIC15.7■□□□□ 0.1
CDH4P55283 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 AL360270.3-201ENST00000609118 1348 ntBASIC15.69■□□□□ 0.1
CDH4P55283 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH4P55283 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH4P55283 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH4P55283 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH4P55283 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CDH4P55283 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH4P55283 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDH4P55283 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH4P55283 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH4P55283 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 OR8S1-201ENST00000310194 1080 ntBASIC15.69■□□□□ 0.1
CDH4P55283 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH4P55283 GK-202ENST00000378941 458 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH4P55283 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CDH4P55283 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH4P55283 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH4P55283 AC234783.1-201ENST00000441761 496 ntBASIC15.69■□□□□ 0.1
CDH4P55283 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CDH4P55283 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDH4P55283 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH4P55283 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH4P55283 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH4P55283 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDH4P55283 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH4P55283 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 MROH4P-201ENST00000431302 1578 ntBASIC15.69■□□□□ 0.1
CDH4P55283 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH4P55283 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH4P55283 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDH4P55283 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH4P55283 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CDH4P55283 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH4P55283 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms