Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB5CP51148 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.46□□□□□ -0.41
RAB5CP51148 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB5CP51148 AP005901.3-202ENST00000581653 237 ntBASIC12.46□□□□□ -0.41
RAB5CP51148 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
RAB5CP51148 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
RAB5CP51148 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB5CP51148 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RAB5CP51148 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.46□□□□□ -0.42
RAB5CP51148 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB5CP51148 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
RAB5CP51148 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
RAB5CP51148 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RAB5CP51148 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.46□□□□□ -0.42
RAB5CP51148 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
RAB5CP51148 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
RAB5CP51148 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB5CP51148 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB5CP51148 AC018892.3-201ENST00000623986 2499 ntBASIC12.46□□□□□ -0.42
RAB5CP51148 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB5CP51148 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB5CP51148 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.46□□□□□ -0.42
RAB5CP51148 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB5CP51148 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
RAB5CP51148 AC055811.4-201ENST00000624039 1754 ntBASIC12.46□□□□□ -0.42
RAB5CP51148 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.46□□□□□ -0.42
RAB5CP51148 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RAB5CP51148 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB5CP51148 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
RAB5CP51148 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB5CP51148 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB5CP51148 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB5CP51148 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB5CP51148 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RAB5CP51148 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RAB5CP51148 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 PTCHD3P3-201ENST00000403073 906 ntBASIC12.45□□□□□ -0.42
RAB5CP51148 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
RAB5CP51148 GPX1P2-201ENST00000429271 606 ntBASIC12.45□□□□□ -0.42
RAB5CP51148 SPDYE13P-201ENST00000445314 798 ntBASIC12.45□□□□□ -0.42
RAB5CP51148 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 TPT1P11-201ENST00000458482 498 ntBASIC12.45□□□□□ -0.42
RAB5CP51148 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.45□□□□□ -0.42
RAB5CP51148 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.45□□□□□ -0.42
RAB5CP51148 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.45□□□□□ -0.42
RAB5CP51148 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.45□□□□□ -0.42
RAB5CP51148 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB5CP51148 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB5CP51148 AC011498.5-201ENST00000592027 486 ntBASIC12.45□□□□□ -0.42
RAB5CP51148 BNIP3P18-201ENST00000593976 575 ntBASIC12.45□□□□□ -0.42
RAB5CP51148 Z69720.1-201ENST00000601483 472 ntBASIC12.45□□□□□ -0.42
RAB5CP51148 AC139887.4-201ENST00000607877 719 ntBASIC12.45□□□□□ -0.42
RAB5CP51148 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.45□□□□□ -0.42
RAB5CP51148 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RAB5CP51148 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RAB5CP51148 CICP11-201ENST00000434745 2827 ntBASIC12.45□□□□□ -0.42
RAB5CP51148 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RAB5CP51148 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RAB5CP51148 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RAB5CP51148 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB5CP51148 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB5CP51148 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB5CP51148 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB5CP51148 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB5CP51148 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB5CP51148 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB5CP51148 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RAB5CP51148 AC018442.1-201ENST00000421439 2061 ntBASIC12.44□□□□□ -0.42
RAB5CP51148 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB5CP51148 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms