Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LHX2P50458 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.72□□□□□ -0.21
LHX2P50458 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.72□□□□□ -0.21
LHX2P50458 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.72□□□□□ -0.21
LHX2P50458 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.72□□□□□ -0.21
LHX2P50458 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.72□□□□□ -0.21
LHX2P50458 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LHX2P50458 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.72□□□□□ -0.21
LHX2P50458 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LHX2P50458 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.72□□□□□ -0.21
LHX2P50458 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.72□□□□□ -0.21
LHX2P50458 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.72□□□□□ -0.21
LHX2P50458 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.72□□□□□ -0.21
LHX2P50458 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.72□□□□□ -0.21
LHX2P50458 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.72□□□□□ -0.21
LHX2P50458 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LHX2P50458 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
LHX2P50458 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LHX2P50458 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LHX2P50458 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LHX2P50458 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LHX2P50458 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LHX2P50458 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LHX2P50458 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.72□□□□□ -0.21
LHX2P50458 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.72□□□□□ -0.21
LHX2P50458 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LHX2P50458 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.72□□□□□ -0.21
LHX2P50458 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.72□□□□□ -0.21
LHX2P50458 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LHX2P50458 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
LHX2P50458 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LHX2P50458 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.71□□□□□ -0.21
LHX2P50458 KRT8P44-201ENST00000441609 1350 ntBASIC13.71□□□□□ -0.21
LHX2P50458 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
LHX2P50458 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LHX2P50458 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LHX2P50458 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.71□□□□□ -0.21
LHX2P50458 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LHX2P50458 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.71□□□□□ -0.21
LHX2P50458 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.71□□□□□ -0.21
LHX2P50458 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.71□□□□□ -0.21
LHX2P50458 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
LHX2P50458 AC099336.1-201ENST00000417053 1171 ntBASIC13.71□□□□□ -0.21
LHX2P50458 HLA-K-203ENST00000430151 1046 ntBASIC13.71□□□□□ -0.21
LHX2P50458 RPS2P32-201ENST00000439199 892 ntBASIC13.71□□□□□ -0.21
LHX2P50458 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
LHX2P50458 FO681548.1-201ENST00000455617 1132 ntBASIC13.71□□□□□ -0.21
LHX2P50458 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.71□□□□□ -0.21
LHX2P50458 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.71□□□□□ -0.21
LHX2P50458 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.71□□□□□ -0.21
LHX2P50458 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.71□□□□□ -0.21
LHX2P50458 AC132938.4-201ENST00000623835 848 ntBASIC13.71□□□□□ -0.21
LHX2P50458 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LHX2P50458 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LHX2P50458 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LHX2P50458 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.71□□□□□ -0.21
LHX2P50458 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.71□□□□□ -0.22
LHX2P50458 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
LHX2P50458 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LHX2P50458 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LHX2P50458 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.71□□□□□ -0.22
LHX2P50458 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.71□□□□□ -0.22
LHX2P50458 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
LHX2P50458 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LHX2P50458 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.71□□□□□ -0.22
LHX2P50458 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
LHX2P50458 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LHX2P50458 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LHX2P50458 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LHX2P50458 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.7□□□□□ -0.22
LHX2P50458 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LHX2P50458 REXO1L4P-201ENST00000605109 1937 ntBASIC13.7□□□□□ -0.22
LHX2P50458 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LHX2P50458 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LHX2P50458 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.7□□□□□ -0.22
LHX2P50458 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LHX2P50458 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LHX2P50458 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LHX2P50458 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.7□□□□□ -0.22
LHX2P50458 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
LHX2P50458 AL360270.3-201ENST00000609118 1348 ntBASIC13.7□□□□□ -0.22
LHX2P50458 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LHX2P50458 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LHX2P50458 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LHX2P50458 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LHX2P50458 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms