Protein–RNA interactions for Protein: P49918

CDKN1C, Cyclin-dependent kinase inhibitor 1C, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1CP49918 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDKN1CP49918 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN1CP49918 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN1CP49918 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN1CP49918 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDKN1CP49918 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN1CP49918 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN1CP49918 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.32■□□□□ 0.04
CDKN1CP49918 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN1CP49918 MYCLP2-201ENST00000449268 967 ntBASIC15.32■□□□□ 0.04
CDKN1CP49918 AC026410.3-201ENST00000514280 936 ntBASIC15.32■□□□□ 0.04
CDKN1CP49918 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.32■□□□□ 0.04
CDKN1CP49918 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKN1CP49918 WASH4P-201ENST00000564273 1246 ntBASIC15.32■□□□□ 0.04
CDKN1CP49918 RRP7BP-205ENST00000566851 833 ntBASIC15.32■□□□□ 0.04
CDKN1CP49918 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.32■□□□□ 0.04
CDKN1CP49918 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.32■□□□□ 0.04
CDKN1CP49918 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDKN1CP49918 CTBP2P3-201ENST00000585629 1255 ntBASIC15.32■□□□□ 0.04
CDKN1CP49918 AC008494.3-201ENST00000606615 944 ntBASIC15.32■□□□□ 0.04
CDKN1CP49918 AC093726.1-201ENST00000608064 963 ntBASIC15.32■□□□□ 0.04
CDKN1CP49918 AC007431.3-201ENST00000623221 587 ntBASIC15.32■□□□□ 0.04
CDKN1CP49918 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN1CP49918 AC011270.2-201ENST00000624293 2550 ntBASIC15.32■□□□□ 0.04
CDKN1CP49918 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKN1CP49918 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKN1CP49918 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN1CP49918 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKN1CP49918 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN1CP49918 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDKN1CP49918 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN1CP49918 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKN1CP49918 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN1CP49918 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKN1CP49918 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKN1CP49918 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDKN1CP49918 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKN1CP49918 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN1CP49918 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN1CP49918 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 AC104457.1-201ENST00000401024 814 ntBASIC15.31■□□□□ 0.04
CDKN1CP49918 PIN1P1-201ENST00000412108 996 ntBASIC15.31■□□□□ 0.04
CDKN1CP49918 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN1CP49918 AL353779.1-201ENST00000434793 351 ntBASIC15.31■□□□□ 0.04
CDKN1CP49918 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKN1CP49918 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKN1CP49918 ELK1P1-201ENST00000485699 580 ntBASIC15.31■□□□□ 0.04
CDKN1CP49918 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKN1CP49918 AC092552.1-201ENST00000547243 906 ntBASIC15.31■□□□□ 0.04
CDKN1CP49918 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKN1CP49918 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKN1CP49918 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKN1CP49918 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN1CP49918 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.31■□□□□ 0.04
CDKN1CP49918 AC092364.2-202ENST00000597012 1073 ntBASIC15.31■□□□□ 0.04
CDKN1CP49918 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CDKN1CP49918 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CDKN1CP49918 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKN1CP49918 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN1CP49918 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDKN1CP49918 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDKN1CP49918 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN1CP49918 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKN1CP49918 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.31■□□□□ 0.04
CDKN1CP49918 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN1CP49918 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDKN1CP49918 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDKN1CP49918 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDKN1CP49918 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDKN1CP49918 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN1CP49918 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN1CP49918 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN1CP49918 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN1CP49918 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN1CP49918 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN1CP49918 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN1CP49918 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN1CP49918 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDKN1CP49918 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN1CP49918 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN1CP49918 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN1CP49918 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN1CP49918 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN1CP49918 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms