Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.17■□□□□ 0.34
TM4SF4P48230 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.16■□□□□ 0.34
TM4SF4P48230 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.16■□□□□ 0.34
TM4SF4P48230 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TM4SF4P48230 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM4SF4P48230 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TM4SF4P48230 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.16■□□□□ 0.34
TM4SF4P48230 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.16■□□□□ 0.34
TM4SF4P48230 LINC01815-202ENST00000641468 1409 ntBASIC17.16■□□□□ 0.34
TM4SF4P48230 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM4SF4P48230 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TM4SF4P48230 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.16■□□□□ 0.34
TM4SF4P48230 AL645933.1-201ENST00000440087 609 ntBASIC17.16■□□□□ 0.34
TM4SF4P48230 LINC00634-202ENST00000505157 222 ntBASIC17.16■□□□□ 0.34
TM4SF4P48230 FAM86KP-201ENST00000509817 987 ntBASIC17.16■□□□□ 0.34
TM4SF4P48230 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.16■□□□□ 0.34
TM4SF4P48230 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TM4SF4P48230 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.16■□□□□ 0.34
TM4SF4P48230 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.16■□□□□ 0.34
TM4SF4P48230 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.16■□□□□ 0.34
TM4SF4P48230 AC133540.1-201ENST00000620845 1019 ntBASIC17.16■□□□□ 0.34
TM4SF4P48230 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM4SF4P48230 AL596087.1-201ENST00000400979 1969 ntBASIC17.16■□□□□ 0.34
TM4SF4P48230 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TM4SF4P48230 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.16■□□□□ 0.34
TM4SF4P48230 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
TM4SF4P48230 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.16■□□□□ 0.34
TM4SF4P48230 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM4SF4P48230 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.16■□□□□ 0.34
TM4SF4P48230 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TM4SF4P48230 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TM4SF4P48230 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.15■□□□□ 0.34
TM4SF4P48230 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.15■□□□□ 0.34
TM4SF4P48230 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
TM4SF4P48230 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.15■□□□□ 0.34
TM4SF4P48230 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC17.15■□□□□ 0.34
TM4SF4P48230 RN7SL396P-201ENST00000471086 295 ntBASIC17.15■□□□□ 0.34
TM4SF4P48230 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TM4SF4P48230 CR383656.3-201ENST00000551315 183 ntBASIC17.15■□□□□ 0.34
TM4SF4P48230 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC17.15■□□□□ 0.34
TM4SF4P48230 MIR4472-1-201ENST00000584349 80 ntBASIC17.15■□□□□ 0.34
TM4SF4P48230 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.15■□□□□ 0.34
TM4SF4P48230 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.15■□□□□ 0.34
TM4SF4P48230 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.15■□□□□ 0.34
TM4SF4P48230 BX088702.1-201ENST00000610784 235 ntBASIC17.15■□□□□ 0.34
TM4SF4P48230 AC018695.6-201ENST00000614011 534 ntBASIC17.15■□□□□ 0.34
TM4SF4P48230 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.15■□□□□ 0.34
TM4SF4P48230 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TM4SF4P48230 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM4SF4P48230 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TM4SF4P48230 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.14■□□□□ 0.33
TM4SF4P48230 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF4P48230 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.14■□□□□ 0.33
TM4SF4P48230 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF4P48230 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF4P48230 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF4P48230 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.14■□□□□ 0.33
TM4SF4P48230 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.14■□□□□ 0.33
TM4SF4P48230 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF4P48230 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF4P48230 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TM4SF4P48230 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF4P48230 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.14■□□□□ 0.33
TM4SF4P48230 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF4P48230 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.14■□□□□ 0.33
TM4SF4P48230 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.14■□□□□ 0.33
TM4SF4P48230 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
TM4SF4P48230 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.14■□□□□ 0.33
TM4SF4P48230 AC005041.3-201ENST00000606287 649 ntBASIC17.14■□□□□ 0.33
TM4SF4P48230 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.14■□□□□ 0.33
TM4SF4P48230 TNRC18P3-201ENST00000441896 2691 ntBASIC17.14■□□□□ 0.33
TM4SF4P48230 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF4P48230 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.14■□□□□ 0.33
TM4SF4P48230 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.14■□□□□ 0.33
TM4SF4P48230 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF4P48230 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.14■□□□□ 0.33
TM4SF4P48230 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM4SF4P48230 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TM4SF4P48230 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms