Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.54□□□□□ -0.08
GABRA4P48169 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 RNA5SP486-201ENST00000515961 83 ntBASIC14.54□□□□□ -0.08
GABRA4P48169 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
GABRA4P48169 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.54□□□□□ -0.08
GABRA4P48169 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRA4P48169 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.54□□□□□ -0.08
GABRA4P48169 RN7SL48P-201ENST00000579283 293 ntBASIC14.54□□□□□ -0.08
GABRA4P48169 AL033527.4-201ENST00000641026 673 ntBASIC14.54□□□□□ -0.08
GABRA4P48169 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
GABRA4P48169 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
GABRA4P48169 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
GABRA4P48169 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRA4P48169 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.54□□□□□ -0.08
GABRA4P48169 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRA4P48169 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.54□□□□□ -0.08
GABRA4P48169 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.54□□□□□ -0.08
GABRA4P48169 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
GABRA4P48169 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
GABRA4P48169 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
GABRA4P48169 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
GABRA4P48169 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
GABRA4P48169 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.53□□□□□ -0.08
GABRA4P48169 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.53□□□□□ -0.08
GABRA4P48169 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
GABRA4P48169 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GABRA4P48169 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GABRA4P48169 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.53□□□□□ -0.08
GABRA4P48169 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
GABRA4P48169 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.53□□□□□ -0.08
GABRA4P48169 AL590640.2-201ENST00000457038 527 ntBASIC14.53□□□□□ -0.08
GABRA4P48169 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.53□□□□□ -0.08
GABRA4P48169 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 AC022616.1-201ENST00000518688 554 ntBASIC14.53□□□□□ -0.08
GABRA4P48169 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.53□□□□□ -0.08
GABRA4P48169 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.53□□□□□ -0.08
GABRA4P48169 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
GABRA4P48169 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
GABRA4P48169 AC079316.1-201ENST00000548397 411 ntBASIC14.53□□□□□ -0.08
GABRA4P48169 AL583810.1-201ENST00000553344 1045 ntBASIC14.53□□□□□ -0.08
GABRA4P48169 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.53□□□□□ -0.08
GABRA4P48169 AC008687.7-202ENST00000637404 953 ntBASIC14.53□□□□□ -0.08
GABRA4P48169 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
GABRA4P48169 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.53□□□□□ -0.08
GABRA4P48169 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.53□□□□□ -0.08
GABRA4P48169 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
GABRA4P48169 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 REXO1L5P-201ENST00000622260 2098 ntBASIC14.53□□□□□ -0.08
GABRA4P48169 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.53□□□□□ -0.08
GABRA4P48169 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
GABRA4P48169 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
GABRA4P48169 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
GABRA4P48169 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.52□□□□□ -0.08
GABRA4P48169 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.52□□□□□ -0.08
GABRA4P48169 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
GABRA4P48169 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GABRA4P48169 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GABRA4P48169 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GABRA4P48169 LRRC59-203ENST00000576448 1531 ntBASIC14.52□□□□□ -0.08
GABRA4P48169 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GABRA4P48169 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GABRA4P48169 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.52□□□□□ -0.08
GABRA4P48169 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GABRA4P48169 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
GABRA4P48169 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GABRA4P48169 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
GABRA4P48169 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GABRA4P48169 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.52□□□□□ -0.08
GABRA4P48169 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
GABRA4P48169 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms