Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP13P45452 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.07■□□□□ 0.16
MMP13P45452 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.07■□□□□ 0.16
MMP13P45452 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.07■□□□□ 0.16
MMP13P45452 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.07■□□□□ 0.16
MMP13P45452 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP13P45452 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP13P45452 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.07■□□□□ 0.16
MMP13P45452 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MMP13P45452 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.07■□□□□ 0.16
MMP13P45452 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP13P45452 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.07■□□□□ 0.16
MMP13P45452 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
MMP13P45452 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.07■□□□□ 0.16
MMP13P45452 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP13P45452 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MMP13P45452 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MMP13P45452 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP13P45452 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
MMP13P45452 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
MMP13P45452 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
MMP13P45452 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP13P45452 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP13P45452 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 AC022144.1-201ENST00000602255 1580 ntBASIC16.06■□□□□ 0.16
MMP13P45452 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP13P45452 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP13P45452 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 MIR770-201ENST00000390219 98 ntBASIC16.06■□□□□ 0.16
MMP13P45452 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.06■□□□□ 0.16
MMP13P45452 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.06■□□□□ 0.16
MMP13P45452 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.06■□□□□ 0.16
MMP13P45452 RNA5SP421-201ENST00000516864 134 ntBASIC16.06■□□□□ 0.16
MMP13P45452 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
MMP13P45452 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 AC009407.1-201ENST00000568958 598 ntBASIC16.06■□□□□ 0.16
MMP13P45452 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
MMP13P45452 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MMP13P45452 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MMP13P45452 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MMP13P45452 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.06■□□□□ 0.16
MMP13P45452 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MMP13P45452 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MMP13P45452 AC063926.3-201ENST00000624734 5658 ntBASIC16.05■□□□□ 0.16
MMP13P45452 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP13P45452 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP13P45452 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MMP13P45452 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MMP13P45452 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MMP13P45452 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP13P45452 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP13P45452 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP13P45452 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms