Protein–RNA interactions for Protein: P33778

HIST1H2BB, Histone H2B type 1-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BBP33778 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 AC079602.3-201ENST00000623931 403 ntBASIC11.59□□□□□ -0.55
HIST1H2BBP33778 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 AC022497.1-201ENST00000624916 3691 ntBASIC11.59□□□□□ -0.55
HIST1H2BBP33778 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 POM121L4P-202ENST00000427789 1891 ntBASIC11.59□□□□□ -0.55
HIST1H2BBP33778 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H2BBP33778 PCDHA5-203ENST00000614258 4248 ntBASIC11.59□□□□□ -0.55
HIST1H2BBP33778 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
HIST1H2BBP33778 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
HIST1H2BBP33778 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
HIST1H2BBP33778 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
HIST1H2BBP33778 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.58□□□□□ -0.55
HIST1H2BBP33778 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
HIST1H2BBP33778 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 AP003097.1-201ENST00000530657 1135 ntBASIC11.58□□□□□ -0.56
HIST1H2BBP33778 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 GPR32P1-201ENST00000601788 811 ntBASIC11.58□□□□□ -0.56
HIST1H2BBP33778 AC080038.1-201ENST00000611274 1154 ntBASIC11.58□□□□□ -0.56
HIST1H2BBP33778 LITAF-220ENST00000620789 692 ntTSL 5 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 AC073111.5-205ENST00000641717 521 ntBASIC11.58□□□□□ -0.56
HIST1H2BBP33778 AC116562.4-202ENST00000641738 218 ntBASIC11.58□□□□□ -0.56
HIST1H2BBP33778 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 PEG13-201ENST00000631594 5667 ntBASIC11.58□□□□□ -0.56
HIST1H2BBP33778 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 FAM90A11P-201ENST00000518378 2218 ntBASIC11.58□□□□□ -0.56
HIST1H2BBP33778 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.58□□□□□ -0.56
HIST1H2BBP33778 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H2BBP33778 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H2BBP33778 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H2BBP33778 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
HIST1H2BBP33778 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H2BBP33778 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H2BBP33778 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC11.57□□□□□ -0.56
HIST1H2BBP33778 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H2BBP33778 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC11.57□□□□□ -0.56
HIST1H2BBP33778 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
HIST1H2BBP33778 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms